RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, human

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHX40-208	ENST00000580218	LBR	Q14739	615 aa	Known RBP	13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	TMEM259	Q4ZIN3	620 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	FAM46C	Q5VWP2	391 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	KIAA0895L	Q68EN5	471 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	AADACL2	Q6P093	401 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ZNF662	Q6ZS27	426 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ZNF354C	Q86Y25	554 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	KIAA2013	Q8IYS2	634 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ATPAF2	Q8N5M1	289 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	SPOCK2	Q92563	424 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	PIGK	Q92643	395 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ECHDC3	Q96DC8	303 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	LRIG1	Q96JA1	1093 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	CCDC114	Q96M63	670 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	CPEB1	Q9BZB8	566 aa	Known RBP	13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	FSCN3	Q9NQT6	498 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	VPS45	Q9NRW7	570 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	DDX56	Q9NY93	547 aa	Known RBP	13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ZFR2	Q9UPR6	939 aa	Known RBP	13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	ITM2B	Q9Y287	266 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	SCN8A	Q9UQD0	1980 aa		13.6	□□□□□ -0.23
DHX40-208	ENST00000580218	LRP4	O75096	1905 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	TTC24	A2A3L6	582 aa	Predicted RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	NDUFS2	O75306	463 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	PALM	O75781	387 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	IGSF6	O95976	241 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	TNNT1	P13805	278 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	ADRB3	P13945	408 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	PTPN7	P35236	360 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	CCR5	P51681	352 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	PPID	Q08752	370 aa	Known RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	ZBTB17	Q13105	803 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	FGL2	Q14314	439 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	LLGL1	Q15334	1064 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	ZNF805	Q5CZA5	627 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	SLC23A3	Q6PIS1	610 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	ERN2	Q76MJ5	926 aa	Known RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	KIAA1328	Q86T90	577 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	TRIM69	Q86WT6	500 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	MAP7D3	Q8IWC1	876 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	ZCCHC9	Q8N567	271 aa	Known RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	EXD1	Q8NHP7	514 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	FOXJ1	Q92949	421 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	CALR3	Q96L12	384 aa	Known RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	LGMN	Q99538	433 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	OMD	Q99983	421 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	SAE1	Q9UBE0	346 aa	Predicted RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	EIF2B4	Q9UI10	523 aa	Known RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	FADS3	Q9Y5Q0	445 aa		13.59	□□□□□ -0.23
DHX40-208	ENST00000580218	BPTF	Q12830	3046 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	C16orf96	A6NNT2	1141 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	AP1G1	O43747	822 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	POP4	O95707	220 aa	Known RBP	13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	FTCD	O95954	541 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	WNT1	P04628	370 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	ITIH2	P19823	946 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	RECQL	P46063	649 aa	Predicted RBP	13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	NEK3	P51956	506 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	IRX4	P78413	519 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	PRKD1	Q15139	912 aa	Predicted RBP	13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	PPP2R5E	Q16537	467 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF284	Q2VY69	593 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	LRRC73	Q5JTD7	316 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	LAYN	Q6UX15	382 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	GDPD4	Q6W3E5	623 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	CAMK1D	Q8IU85	385 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	LRRC49	Q8IUZ0	686 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	CNTD1	Q8N815	330 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	OR14C36	Q8NHC7	312 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	ARRDC2	Q8TBH0	407 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	HES6	Q96HZ4	224 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	KLHL32	Q96NJ5	620 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	CINP	Q9BW66	212 aa	Predicted RBP	13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	OSBPL1A	Q9BXW6	950 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	KDM4C	Q9H3R0	1056 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	TM9SF3	Q9HD45	589 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	DKK3	Q9UBP4	350 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	SEPT3	Q9UH03	358 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218	NCKAP1	Q9Y2A7	1128 aa		13.58	□□□□□ -0.24
DHX40-208	ENST00000580218		A0A1W2PPC4	97 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218		A0A1W2PR77	199 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	MEI4	A8MW99	385 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	GOLGA6L6	A8MZA4	724 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	CDX4	O14627	284 aa	Predicted RBP	13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	APOL1	O14791	398 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	MATN3	O15232	486 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	HTRA2	O43464	458 aa	Predicted RBP	13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	FSBP	O95073	299 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	HLA-DQB2	P05538	268 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	PYGM	P11217	842 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	TIMP2	P16035	220 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	CCNC	P24863	283 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	CD27	P26842	260 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	MAX	P61244	160 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	DYNLT1	P63172	113 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	IFI35	P80217	286 aa	Predicted RBP	13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	KIF5A	Q12840	1032 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms