RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PNMA6AP0CW24 399 aaPredicted RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 PLA2G2AP14555 144 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 TGM2P21980 687 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 XPAP23025 273 aaPredicted RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 PRRT3Q5FWE3 981 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 C3orf38Q5JPI3 329 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 GDPD4Q6W3E5 623 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 ZNF354CQ86Y25 554 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 WDR36Q8NI36 951 aaKnown RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 CASKIN2Q8WXE0 1202 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 ARHGEF2Q92974 986 aaKnown RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 CPNE5Q9HCH3 593 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 ZNF212Q9UDV6 495 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 APOBEC3BQ9UH17 382 aaKnown RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 SATB2Q9UPW6 733 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 PCDHGA8Q9Y5G5 932 aa18.17■□□□□ 0.5
MKS1-209ENST00000580127 FLNBO75369 2602 aaKnown RBP18.17■□□□□ 0.5
MKS1-209ENST00000580127 LY6G6EA0A0G2JKS1 128 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 LMO7DNF2Z398 122 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 RNF103O00237 685 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 MUSKO15146 869 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 RAMP2O60895 175 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 TM7SF2O76062 418 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 ERCC5P28715 1186 aaPredicted RBP18.16■□□□□ 0.5
MKS1-209ENST00000580127 SUOXP51687 545 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 ADKP55263 362 aaKnown RBP18.16■□□□□ 0.5
MKS1-209ENST00000580127 PFN3P60673 137 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 PPARDQ03181 441 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 BNIPLQ7Z465 357 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 SDR16C5Q8N3Y7 309 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 FSTL5Q8N475 847 aaPredicted RBP18.16■□□□□ 0.5
MKS1-209ENST00000580127 ATL2Q8NHH9 583 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 CXorf40AQ8TE69 158 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 CENPTQ96BT3 561 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 ATXN7L3BQ96GX2 97 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 GDAP1L1Q96MZ0 367 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 KLHL32Q96NJ5 620 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 ASCL3Q9NQ33 180 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 AJAP1Q9UKB5 411 aaPredicted RBP18.16■□□□□ 0.5
MKS1-209ENST00000580127 U3KQA8 63 aa18.16■□□□□ 0.5
MKS1-209ENST00000580127 KALRNO60229 2985 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 J3QKU1 62 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 BUB1O43683 1085 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 KDELR3O43731 214 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 UGT2B4P06133 528 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 TPM2P07951 284 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 PLEKP08567 350 aaPredicted RBP18.15■□□□□ 0.5
MKS1-209ENST00000580127 CTSEP14091 401 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 UCHL3P15374 230 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 ACVRL1P37023 503 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 SPIDRQ14159 915 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 ELOCQ15369 112 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 NAA35Q5VZE5 725 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 GUSBP11Q6P575 273 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 FOXR1Q6PIV2 292 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 LVRNQ6Q4G3 990 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 STRADAQ7RTN6 431 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 VPS36Q86VN1 386 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 TBC1D31Q96DN5 1066 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 BOCQ9BWV1 1114 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 TMEM248Q9NWD8 314 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 KLF15Q9UIH9 416 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 PADI4Q9UM07 663 aa18.15■□□□□ 0.5
MKS1-209ENST00000580127 IGSF6O95976 241 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 ALPIP09923 528 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 HTR1BP28222 390 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 EIF4A3P38919 411 aaKnown RBP18.14■□□□□ 0.49
MKS1-209ENST00000580127 PEX5P50542 639 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 EIF2B5Q13144 721 aaKnown RBP18.14■□□□□ 0.49
MKS1-209ENST00000580127 CDO1Q16878 200 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 INO80DQ53TQ3 878 aaPredicted RBP18.14■□□□□ 0.49
MKS1-209ENST00000580127 C2CD6Q53TS8 623 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 C6orf132Q5T0Z8 1188 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 CCDC81Q6ZN84 652 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 PHACTR4Q8IZ21 702 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 OR6C4Q8NGE1 309 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 OR6K2Q8NGY2 324 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 SNRNP27Q8WVK2 155 aaKnown RBP18.14■□□□□ 0.49
MKS1-209ENST00000580127 RXFP2Q8WXD0 754 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 TTYH3Q9C0H2 523 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 STRADBQ9C0K7 418 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 METTL5Q9NRN9 209 aaKnown RBP18.14■□□□□ 0.49
MKS1-209ENST00000580127 DONSONQ9NYP3 566 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 ENTPD2Q9Y5L3 495 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
MKS1-209ENST00000580127 RP1P56715 2156 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 COL6A6A6NMZ7 2263 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 CCDC187A0A096LP49 1063 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 ANKRD62A6NC57 917 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 AREL1O15033 823 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 SPINT1O43278 529 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 MMP20O60882 483 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 TNFSF15O95150 251 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 ZIC2O95409 532 aaPredicted RBP18.13■□□□□ 0.49
MKS1-209ENST00000580127 CD160O95971 181 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 MMEP08473 750 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 DESP17661 470 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms