RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 CCL15Q16663 113 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 DEPDC1Q5TB30 811 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 TLDC1Q6P9B6 456 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 IL27RAQ6UWB1 636 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 CBR4Q8N4T8 237 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 LPCAT1Q8NF37 534 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 GAD1Q99259 594 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 COQ10BQ9H8M1 238 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 POLG2Q9UHN1 485 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 C17orf102A2RUQ5 167 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 CCL22O00626 93 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZNF197O14709 1029 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 GCATO75600 419 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 ARHGEF7Q14155 803 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 TRIM25Q14258 630 aaKnown RBP13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 LAMA4Q16363 1823 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 METTL21CQ5VZV1 264 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 DCP1BQ8IZD4 617 aaKnown RBP13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 SKA1Q96BD8 255 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 MROH8Q9H579 483 aa13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 PRDM5Q9NQX1 630 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC8-207ENST00000580104 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 SERPINF2P08697 491 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 MLNP12872 115 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 CCR3P51677 355 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 OLIG2Q13516 323 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 TTC30AQ86WT1 665 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 FADS3Q9Y5Q0 445 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 AGRPO00253 132 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 RAMP2O60895 175 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 OR6B1O95007 311 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 OR1E1P30953 314 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 GPD2P43304 727 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 CCNG1P51959 295 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC25A52Q3SY17 297 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC44A2Q8IWA5 706 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 EID3Q8N140 333 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 DENND1AQ8TEH3 1009 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 PARVBQ9HBI1 364 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 FAM20BO75063 409 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 CKMT2P17540 419 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 MAPRE1Q15691 268 aaKnown RBP13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 VPS26BQ4G0F5 336 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 TIGD2Q4W5G0 525 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
TRAPPC8-207ENST00000580104 MYH11P35749 1972 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 A0A0J9YYE9 177 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 NMBRP28336 390 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 SLC18A2Q05940 514 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 HDAC10Q969S8 669 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 ACTR8Q9H981 624 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 RAD54BQ9Y620 910 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 SLIT2O94813 1529 aa13.71□□□□□ -0.22
TRAPPC8-207ENST00000580104 NEMP2A6NFY4 417 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 ADRA1BP35368 520 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 THPOP40225 353 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 RAP1GDS1P52306 607 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 KCNJ11Q14654 390 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 CGB2Q6NT52 195 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 DENND6AQ8IWF6 608 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 OR8H2Q8N162 312 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 SFRP1Q8N474 314 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 FSTL5Q8N475 847 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 NIPA2Q8N8Q9 360 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 RDH11Q8TC12 318 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 ACTRT2Q8TDY3 377 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 UTP15Q8TED0 518 aaKnown RBP13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 CLPBQ9H078 707 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 SELENONQ9NZV5 590 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 MYOCOSA0A1B0GUC4 107 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 F5H5T6 163 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 SEC22BO75396 215 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 CCNA2P20248 432 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 ZFYVE19Q96K21 471 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 MPP6Q9NZW5 540 aa13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 MAFBQ9Y5Q3 323 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC8-207ENST00000580104 SNX10Q9Y5X0 201 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms