RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 CACUL1Q86Y37 369 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 SLC13A5Q86YT5 568 aaPredicted RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 RFX6Q8HWS3 928 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 CREG2Q8IUH2 290 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 CCDC117Q8IWD4 279 aaPredicted RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF683Q8IZ20 524 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 LGI2Q8N0V4 545 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 PYROXD2Q8N2H3 581 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 RPRD1AQ96P16 312 aaPredicted RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 MKRN2Q9H000 416 aaKnown RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 KLHL11Q9NVR0 708 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 XPO7Q9UIA9 1087 aaKnown RBP10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
SNRPD1-203ENST00000579618 MYLKQ15746 1914 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 CHD5Q8TDI0 1954 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 CAPN8A6NHC0 703 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FAM72CH0Y354 149 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 APOC4-APOC2K7ER74 178 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 CBX4O00257 560 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 CST8O60676 142 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 APOC2P02655 101 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FGGP02679 453 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 SLC6A4P31645 630 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 ETFBP38117 255 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 SRSF1Q07955 248 aaKnown RBP eCLIP10.48□□□□□ -0.732e-8■□□□□ 10.7
SNRPD1-203ENST00000579618 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF211Q13398 564 aaPredicted RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 LY6DQ14210 128 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 SUZ12Q15022 739 aaKnown RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 PAFAH1B3Q15102 231 aaKnown RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 LONRF2Q1L5Z9 754 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FUT11Q495W5 492 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FAM72AQ5TYM5 149 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FAM72DQ6L9T8 149 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF783Q6ZMS7 281 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 TMPRSS12Q86WS5 348 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FAM72BQ86X60 149 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 LRRC49Q8IUZ0 686 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 RTL3Q8N8U3 475 aaKnown RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 CADM4Q8NFZ8 388 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 PCDH19Q8TAB3 1148 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 COG1Q8WTW3 980 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 SNX19Q92543 992 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 TMA16Q96EY4 203 aaKnown RBP10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 BRD8Q9H0E9 1235 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 TMEM248Q9NWD8 314 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 MARK1Q9P0L2 795 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 FTSJ1Q9UET6 329 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 NEU3Q9UQ49 428 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 MRFAP1Q9Y605 127 aa10.48□□□□□ -0.73
SNRPD1-203ENST00000579618 PLXNA2O75051 1894 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 NEDD8-MDP1E9PL57 170 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 H0Y8X5 98 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 CCDC188H7C350 402 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 KRT10P13645 584 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ERCC2P18074 760 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 MX2P20592 715 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 OR1E1P30953 314 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 HNF1BP35680 557 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 CCT8P50990 548 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 TPMTP51580 245 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 NDST2P52849 883 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 YBEYP58557 167 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 TARDBPQ13148 414 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 DNAJC3Q13217 504 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF177Q13360 481 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 SLC12A1Q13621 1099 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 PREPLQ4J6C6 727 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ARTNQ5T4W7 220 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 KAZNQ674X7 775 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ZNF572Q7Z3I7 529 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 C14orf80Q86SX3 495 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 SETD3Q86TU7 594 aaPredicted RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 NLRP14Q86W24 1093 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 PLD5Q8N7P1 536 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 CEP112Q8N8E3 955 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 P3H4Q92791 437 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 HAUS1Q96CS2 278 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 HEMGNQ9BXL5 484 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 SLC2A11Q9BYW1 496 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 ITM2CQ9NQX7 267 aa10.47□□□□□ -0.73
SNRPD1-203ENST00000579618 PTPRQQ9UMZ3 2332 aa10.46□□□□□ -0.73
SNRPD1-203ENST00000579618 CXorf51AA0A1B0GTR3 108 aa10.46□□□□□ -0.73
SNRPD1-203ENST00000579618 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms