RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	SPTLC3	Q9NUV7	552 aa		13.85	□□□□□ -0.19
CSNK1D-208	ENST00000578501	KLK13	Q9UKR3	277 aa		13.85	□□□□□ -0.19
CSNK1D-208	ENST00000578501		A0A1B0GVT2	93 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	AP1G1	O43747	822 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LCA5L	O95447	670 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CER1	O95813	267 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	KRT7	P08729	469 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ADRB3	P13945	408 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	IL4R	P24394	825 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RHOA	P61586	193 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SIM1	P81133	766 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	IL10RB	Q08334	325 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HNRNPD	Q14103	355 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	GRM3	Q14832	879 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	FBXL19	Q6PCT2	694 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TMCO3	Q6UWJ1	677 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ZSCAN30	Q86W11	494 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CCDC170	Q8IYT3	715 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RYBP	Q8N488	228 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HCAR2	Q8TDS4	363 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RAB7B	Q96AH8	199 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SERAC1	Q96JX3	654 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PANX2	Q96RD6	677 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CPEB1	Q9BZB8	566 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LHX3	Q9UBR4	397 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ANKRD6	Q9Y2G4	727 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CACNA1E	Q15878	2313 aa		13.84	□□□□□ -0.19
CSNK1D-208	ENST00000578501		A0A1W2PR77	199 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KRIT1	O00522	736 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	DFNA5	O60443	496 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RNGTT	O60942	597 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	AMPD1	P23109	780 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CD38	P28907	300 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SERPINB6	P35237	376 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SSR1	P43307	286 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CSNK1D	P48730	415 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CDH6	P55285	790 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	OVGP1	Q12889	678 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KRT81	Q14533	505 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PDK2	Q15119	407 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KIF19	Q2TAC6	998 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF284	Q2VY69	593 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HLA-B	Q31612	363 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SETMAR	Q53H47	684 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC45A4	Q5BKX6	768 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TMCO4	Q5TGY1	634 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NAPEPLD	Q6IQ20	393 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PARS2	Q7L3T8	475 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ADAT2	Q7Z6V5	191 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PIP4P1	Q86T03	277 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PDZD3	Q86UT5	571 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	IQCH	Q86VS3	1027 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HORMAD1	Q86X24	394 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LRRC49	Q8IUZ0	686 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MAP7D3	Q8IWC1	876 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MFSD2A	Q8NA29	543 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	OR6K2	Q8NGY2	324 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RFFL	Q8WZ73	363 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC6A18	Q96N87	628 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF599	Q96NL3	588 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GAREM1	Q9H706	876 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SP110	Q9HB58	689 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	DKK3	Q9UBP4	350 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	IPO11	Q9UI26	975 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GPSM3	Q9Y4H4	160 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCDHGB2	Q9Y5G2	931 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FADS3	Q9Y5Q0	445 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SPEG	Q15772	3267 aa		13.83	□□□□□ -0.2
CSNK1D-208	ENST00000578501		A0A1W2PQU0	124 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	EIF4E1B	A6NMX2	242 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	C16orf96	A6NNT2	1141 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PRAMEF26	H0Y7S4	382 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	DFFA	O00273	331 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TSPAN6	O43657	245 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PALM	O75781	387 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	UGT2B4	P06133	528 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CD59	P13987	128 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FECH	P22830	423 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GK	P32189	559 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CTSK	P43235	329 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SUOX	P51687	545 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TAS2R40	P59535	323 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RPS21	P63220	83 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	DPYSL3	Q14195	570 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MESD	Q14696	234 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF423	Q2M1K9	1284 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TMEM259	Q4ZIN3	620 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KIAA1161	Q6NSJ0	714 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GDPD4	Q6W3E5	623 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	DBX2	Q6ZNG2	339 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KCTD6	Q8NC69	237 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	OR2I1P	Q8NGU4	316 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FEM1C	Q96JP0	617 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF641	Q96N77	438 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TUBGCP5	Q96RT8	1024 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF670	Q9BS34	389 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ANP32E	Q9BTT0	268 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 158 ms