RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ESRP1Q6NXG1 681 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 PIWIL4Q7Z3Z4 852 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 MTG1Q9BT17 334 aaPredicted RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 RIBC2Q9H4K1 309 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 EFR3BQ9Y2G0 817 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 PCDHB7Q9Y5E2 793 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 NT5C1B-RDH14C9J2C7 533 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 HOXC6P09630 235 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 KLRC2P26717 231 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 CHRNA4P43681 627 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 FSCN1Q16658 493 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 GPR107Q5VW38 600 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 LRRC8BQ6P9F7 803 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 B3GNT6Q6ZMB0 384 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 DEFB128Q7Z7B8 93 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 CCDC103Q8IW40 242 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 OR6K2Q8NGY2 324 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 TPD52L3Q96J77 140 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 BDH2Q9BUT1 245 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 FAM192AQ9GZU8 254 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 DYRK4Q9NR20 520 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 CLUHO75153 1309 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 MSCO60682 206 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 MYL4P12829 197 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 UQCRBP14927 111 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 LBPP18428 481 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 YWHAQP27348 245 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 NMBRP28336 390 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 ASPAP45381 313 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.46
ERBB2-206ENST00000578373 PERM1Q5SV97 790 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 SPESP1Q6UW49 350 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 CAPN10Q9HC96 672 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.46
ERBB2-206ENST00000578373 STX16-NPEPL1H3BU86 382 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 CABYRO75952 493 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 KRT8P05787 483 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 VAV1P15498 845 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 HOXD10P28358 340 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ITGADQ13349 1161 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TTLL9Q3SXZ7 439 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TEX44Q53QW1 395 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 VPS37AQ8NEZ2 397 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 PALMDQ9NP74 551 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 SPAG4Q9NPE6 437 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 CFAP99D6REC4 459 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 AHCYL1O43865 530 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ITGALP20701 1170 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 RGS2P41220 211 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 IRF9Q00978 393 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 LSM12Q3MHD2 195 aaKnown RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 SCARA3Q6AZY7 606 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TDRPQ86YL5 185 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 GPSM1Q86YR5 675 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 BPIFB6Q8NFQ5 453 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 MAGEC3Q8TD91 643 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 PIWIL1Q96J94 861 aaKnown RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 C7orf26Q96N11 449 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 FOPNLQ96NB1 174 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 SERPINB11Q96P15 392 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ST3GAL5Q9UNP4 418 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 MFHAS1Q9Y4C4 1052 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 LRIG2O94898 1065 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TSHRP16473 764 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 GALK1P51570 392 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 HSPA14Q0VDF9 509 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ADRM1Q16186 407 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 SOWAHAQ2M3V2 549 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ZDHHC13Q8IUH4 622 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 DCAKDQ8WVC6 231 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 NR1H4Q96RI1 486 aaPredicted RBP12.14□□□□□ -0.47
ERBB2-206ENST00000578373 RHOJQ9H4E5 214 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 POMPQ9Y244 141 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ANKRD6Q9Y2G4 727 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TREHO43280 583 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 EPB42P16452 691 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 CD52P31358 61 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 SNX17Q15036 470 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 AP5B1Q2VPB7 878 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 LIN52Q52LA3 116 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 GCNT7Q6ZNI0 430 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms