RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 GBA3Q9H227 469 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 C10orf88Q9H8K7 445 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 GLOD4Q9HC38 313 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 SPATA6Q9NWH7 488 aaPredicted RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 MRFAP1Q9Y605 127 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 BPTFQ12830 3046 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 TRAFD1O14545 582 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 ZBTB24O43167 697 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 LAMTOR5O43504 91 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 LEFTY1O75610 366 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 GJB3O75712 270 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 STK10O94804 968 aaKnown RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 ITGB7P26010 798 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 DRD3P35462 400 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 PAFAH1B1P43034 410 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 NRLP54845 237 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 MAXP61244 160 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 LMNB2Q03252 620 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 RAD51Q06609 339 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 IHHQ14623 411 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 CST6Q15828 149 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 WHAMMP3Q1A5X7 153 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ANKRD20A3Q5VUR7 823 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 USP30Q70CQ3 517 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 PPP1R2P1Q96PQ5 205 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 FCRL5Q96RD9 977 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 SEMA3CQ99985 751 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 GORASP1Q9BQQ3 440 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 FAM126AQ9BYI3 521 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 CEP41Q9BYV8 373 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ZDHHC6Q9H6R6 413 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 NOD2Q9HC29 1040 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 SEPT10Q9P0V9 454 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 KLHL8Q9P2G9 620 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
MKS1-206ENST00000577824 SARDHQ9UL12 918 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 ZNF148Q9UQR1 794 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
MKS1-206ENST00000577824 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 C10orf142B7Z368 130 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 GALR2O43603 387 aaPredicted RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 FZD6O60353 706 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 NEBLO76041 1014 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SERPINF2P08697 491 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 NFKB1P19838 968 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 C5AR1P21730 350 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SERPINA4P29622 427 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SCNN1BP51168 640 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SKOR1P84550 965 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 DSC2Q02487 901 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 SNX1Q13596 522 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 ZNF805Q5CZA5 627 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 ANO7Q6IWH7 933 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 GDPD4Q6W3E5 623 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 AADATQ8N5Z0 425 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 OR6K2Q8NGY2 324 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 HMGB4Q8WW32 186 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 PPP1R16AQ96I34 528 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
MKS1-206ENST00000577824 PCDH9Q9HC56 1237 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
MKS1-206ENST00000577824 SLC7A4O43246 635 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 BNIP3LO60238 219 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 ABCB7O75027 752 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 ZNF217O75362 1048 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
MKS1-206ENST00000577824 PIGNO95427 931 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 IL1BP01584 269 aa12.83□□□□□ -0.36
MKS1-206ENST00000577824 DNTTP04053 509 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms