RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 EZH1Q92800 747 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TEKT5Q96M29 485 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TMEM121Q9BTD3 319 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 THAP10Q9P2Z0 257 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF148Q9UQR1 794 aa11.32□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SPTA1P02549 2419 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TBC1D3BA6NDS4 549 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CBX4O00257 560 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SNAP91O60641 907 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 EPN2O95208 641 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CR2P20023 1033 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CSRP1P21291 193 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GLDCP23378 1020 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PTPN3P26045 913 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KCNJ1P48048 391 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SERPINH1P50454 418 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MRPS21P82921 87 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLC10A7Q0GE19 358 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 AP1B1Q10567 949 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCINQ13939 588 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CYTH1Q15438 398 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLC14A2Q15849 920 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TPRG1Q6ZUI0 275 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MAATS1Q7Z4T9 603 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FRS2Q8WU20 508 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SEC14L1Q92503 715 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FAM3CQ92520 227 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF419Q96HQ0 510 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MGME1Q9BQP7 344 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DDX47Q9H0S4 455 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ARRDC1-AS1Q9H2J1 176 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SP110Q9HB58 689 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 UBA2Q9UBT2 640 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KCNN4O15554 427 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 OPHN1O60890 802 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MT-CO1P00395 513 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SRCP12931 536 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SOX9P48436 509 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GDF10P55107 478 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GRSF1Q12849 480 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CBLBQ13191 982 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SRSF5Q13243 272 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SNX1Q13596 522 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PARP6Q2NL67 630 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ANKRD20A2Q5SQ80 823 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ANKRD20A1Q5TYW2 823 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NAIF1Q69YI7 327 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF567Q8N184 647 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TTC8Q8TAM2 541 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCHCR1Q8TD31 782 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NSMCE1Q8WV22 266 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 VOPP1Q96AW1 172 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SPATA13Q96N96 652 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PPP1R2P1Q96PQ5 205 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CARD6Q9BX69 1037 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PCDH9Q9HC56 1237 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RBM22Q9NW64 420 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLCO3A1Q9UIG8 710 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PLA2G4CQ9UP65 541 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PCDHGA5Q9Y5G8 931 aa11.3□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ASXL3Q9C0F0 2248 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KCNK1O00180 336 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ECEL1O95672 775 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GAS8O95995 478 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 JCHAINP01591 159 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CHRNB1P11230 501 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 IVDP26440 423 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HOXA6P31267 233 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NNMTP40261 264 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MAGEA6P43360 314 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MMP13P45452 471 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CXCL12P48061 93 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms