RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FZD3Q9NPG1 666 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 TMEM74BQ9NUR3 256 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 FBXL12Q9NXK8 326 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 SEPT10Q9P0V9 454 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 RCOR3Q9P2K3 495 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 HECAQ9UBI9 543 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PPM1HQ9ULR3 514 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 CA5BQ9Y2D0 317 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 TTLL3Q9Y4R7 772 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 PCDHA3Q9Y5H8 950 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 SCN8AQ9UQD0 1980 aa8.02□□□□□ -1.13
CCDC40-215ENST00000576033 GON4LQ3T8J9 2241 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 WNT9AO14904 365 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 MCF2LO15068 1137 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 NPC1O15118 1278 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 DNTTP04053 509 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 TUBBP07437 444 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ACADMP11310 421 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CD6P30203 668 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 MAT2AP31153 395 aaKnown RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 DHPSP49366 369 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 VASPP50552 380 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ADPRHP54922 357 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 DSC2Q02487 901 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 NIPAL4Q0D2K0 466 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 OLIG2Q13516 323 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RPS6KA1Q15418 735 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 TFDP3Q5H9I0 405 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 TMCO4Q5TGY1 634 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 PMS2CLQ68D20 193 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RETSATQ6NUM9 610 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 WDR93Q6P2C0 686 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 NCEH1Q6PIU2 408 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 PRUNE1Q86TP1 453 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ZC3H18Q86VM9 953 aaKnown RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CAMK1DQ8IU85 385 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 PCDH20Q8N6Y1 951 aaKnown RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 KDM1BQ8NB78 822 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CCNYQ8ND76 341 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 SPATA4Q8NEY3 305 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 OR2I1PQ8NGU4 316 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 EXD1Q8NHP7 514 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC26Q8TAB7 109 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ACTRT1Q8TDG2 376 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ATG4AQ8WYN0 398 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 SNX19Q92543 992 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RUBCNQ92622 972 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 HSPA12BQ96MM6 686 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 KLHL32Q96NJ5 620 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CINPQ9BW66 212 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 PARD6BQ9BYG5 372 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 OSBPL8Q9BZF1 889 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 CEP44Q9C0F1 390 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ARRDC1-AS1Q9H2J1 176 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 ITM2CQ9NQX7 267 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RXFP3Q9NSD7 469 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 TMEM51Q9NW97 253 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 WSB2Q9NYS7 404 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-215ENST00000576033 SUN2Q9UH99 717 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 LCMT1Q9UIC8 334 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 AMFRQ9UKV5 643 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 HPCAL4Q9UM19 191 aa8.01□□□□□ -1.13
CCDC40-215ENST00000576033 RIF1Q5UIP0 2472 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC163A0A0D9SF12 145 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC151A5D8V7 595 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 A8MX80 341 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 MIF4GDA9UHW6 222 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 FSBPO95073 299 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ZRANB2O95218 330 aaKnown RBP eCLIP8□□□□□ -1.13
CCDC40-215ENST00000576033 SEMA4FO95754 770 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 IGSF6O95976 241 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ADH1BP00325 375 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 GSRP00390 522 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 IGLV3-19P01714 112 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 IGHV4-34P06331 123 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 MMP2P08253 660 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 CR2P20023 1033 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SERPINB6P35237 376 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 NNMTP40261 264 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SCNN1BP51168 640 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 RWDD2BP57060 319 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 OTUD4Q01804 1114 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 CREB5Q02930 508 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SPEM2Q0P670 501 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 AP1B1Q10567 949 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 TRAF2Q12933 501 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 FGL2Q14314 439 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF235Q14590 738 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 BRD3Q15059 726 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 PRKD1Q15139 912 aaPredicted RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 NOMO1Q15155 1222 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SF3A2Q15428 464 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 MYLK3Q32MK0 819 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 USP39Q53GS9 565 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 SEL1L3Q68CR1 1132 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms