RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ANKRD20A3Q5VUR7 823 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 ANO7Q6IWH7 933 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 PID1Q7Z2X4 250 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 CCDC89Q8N998 374 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 ATL2Q8NHH9 583 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 PIP4K2CQ8TBX8 421 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 GRK7Q8WTQ7 553 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 ERLEC1Q96DZ1 483 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 SIPA1Q96FS4 1042 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 PPP1R16AQ96I34 528 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 RUNDC3BQ96NL0 473 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 SLC25A51Q9H1U9 297 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 GBA3Q9H227 469 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 EBF1Q9UH73 591 aa17.3■□□□□ 0.36
NUP88-210ENST00000574867 FEZ2Q9UHY8 353 aaPredicted RBP17.3■□□□□ 0.36
NUP88-210ENST00000574867 CUL9Q8IWT3 2517 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 K7ESF4 209 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 GCATO75600 419 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 LEFTY1O75610 366 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 CTSLP07711 333 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 SERPINA4P29622 427 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 ACTN2P35609 894 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 COILP38432 576 aaPredicted RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 GDF10P55107 478 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 RPS14P62263 151 aaKnown RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 SFSWAPQ12872 951 aaKnown RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 TTC31Q49AM3 519 aaPredicted RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 NCEH1Q6PIU2 408 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 ZNF572Q7Z3I7 529 aaPredicted RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 MMAAQ8IVH4 418 aaKnown RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 MDGA1Q8NFP4 955 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 ZNF641Q96N77 438 aaPredicted RBP17.29■□□□□ 0.36
NUP88-210ENST00000574867 PPP1R2P1Q96PQ5 205 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 NOD2Q9HC29 1040 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 RSPH14Q9UHP6 348 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 FBXO4Q9UKT5 387 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 MRFAP1Q9Y605 127 aa17.29■□□□□ 0.36
NUP88-210ENST00000574867 SOCS5O75159 536 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 DNTTP04053 509 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 SERPINF2P08697 491 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 C5AR1P21730 350 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 CA4P22748 312 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 PSMD8P48556 350 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 DSC2Q02487 901 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 BCL2L1Q07817 233 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 ARSIQ5FYB1 569 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 ARRDC2Q8TBH0 407 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 IMP4Q96G21 291 aaKnown RBP17.28■□□□□ 0.36
NUP88-210ENST00000574867 ANKRD36A6QL64 1941 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 IFNB1P01574 187 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 ACADMP11310 421 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 NFKB1P19838 968 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 CD68P34810 354 aaPredicted RBP17.28■□□□□ 0.36
NUP88-210ENST00000574867 KCNJ1P48048 391 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 TTC27Q6P3X3 843 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 KIAA1324Q6UXG2 1013 aaKnown RBP17.28■□□□□ 0.36
NUP88-210ENST00000574867 C4orf22Q6V702 233 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 GDPD4Q6W3E5 623 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 PGBD3Q8N328 593 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 CCDC110Q8TBZ0 833 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 FCRL5Q96RD9 977 aa17.28■□□□□ 0.36
NUP88-210ENST00000574867 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 KPNA3O00505 521 aaPredicted RBP17.27■□□□□ 0.36
NUP88-210ENST00000574867 GJB3O75712 270 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 GAS8O95995 478 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 UGT2B4P06133 528 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 ITGB7P26010 798 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 GKP32189 559 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 SLC8A1P32418 973 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 NRLP54845 237 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 NIPAL4Q0D2K0 466 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 CACUL1Q86Y37 369 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 SPATA4Q8NEY3 305 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 HCAR2Q8TDS4 363 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 VOPP1Q96AW1 172 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 DDX47Q9H0S4 455 aaKnown RBP17.27■□□□□ 0.36
NUP88-210ENST00000574867 PABPC3Q9H361 631 aaKnown RBP17.27■□□□□ 0.36
NUP88-210ENST00000574867 DYRK4Q9NR20 520 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 VPS45Q9NRW7 570 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 PCYOX1Q9UHG3 505 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 SARDHQ9UL12 918 aa17.27■□□□□ 0.36
NUP88-210ENST00000574867 A0A1W2PQ67 120 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 DLL1O00548 723 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 PIGNO95427 931 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 CD86P42081 329 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 ZNF805Q5CZA5 627 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 SLCO2A1Q92959 643 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 SLC6A17Q9H1V8 727 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 PCDH9Q9HC56 1237 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 PAK5Q9P286 719 aa17.27■□□□□ 0.35
NUP88-210ENST00000574867 TTC24A2A3L6 582 aaPredicted RBP17.26■□□□□ 0.35
NUP88-210ENST00000574867 MID1O15344 667 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 ZNF217O75362 1048 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 ANXA9O76027 345 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 ECEL1O95672 775 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 MMP2P08253 660 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms