RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 PDLIM2Q96JY6 352 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 KLHL32Q96NJ5 620 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 TSGA13Q96PP4 275 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 TUBGCP5Q96RT8 1024 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 CPEB1Q9BZB8 566 aaKnown RBP24.6■■□□□ 1.53
LITAF-213ENST00000574701 SUSD2Q9UGT4 822 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 TPX2Q9ULW0 747 aaKnown RBP24.6■■□□□ 1.53
LITAF-213ENST00000574701 PPP2R2CQ9Y2T4 447 aa24.6■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3DA0A087WVF3 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3IA0A087WXS9 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3EA0A087X179 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3KA0A087X1G2 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3FA6NER0 549 aaPredicted RBP24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3LB9A6J9 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 INSIG1O15503 277 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 PEX11BO96011 259 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3HP0C7X1 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 NR2C2P49116 596 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 NSUN2Q08J23 767 aaKnown RBP eCLIP24.59■■□□□ 1.53
LITAF-213ENST00000574701 SLC10A2Q12908 348 aaPredicted RBP24.59■■□□□ 1.53
LITAF-213ENST00000574701 HNRNPDQ14103 355 aaKnown RBP24.59■■□□□ 1.53
LITAF-213ENST00000574701 LLGL1Q15334 1064 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3GQ6DHY5 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3CQ6IPX1 549 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 NPNTQ6UXI9 565 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 PARS2Q7L3T8 475 aaKnown RBP24.59■■□□□ 1.53
LITAF-213ENST00000574701 TBC1D3Q8IZP1 549 aaPredicted RBP24.59■■□□□ 1.53
LITAF-213ENST00000574701 FATE1Q969F0 183 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 ATP13A3Q9H7F0 1226 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 PREBQ9HCU5 417 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 SEMA4GQ9NTN9 838 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 PILRBQ9UKJ0 227 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 OTOGLQ3ZCN5 2332 aa24.59■■□□□ 1.53
LITAF-213ENST00000574701 MYO15AQ9UKN7 3530 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 GPR179Q6PRD1 2367 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 RNF103O00237 685 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 MATN3O15232 486 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 FOXD2O60548 495 aaPredicted RBP24.58■■□□□ 1.53
LITAF-213ENST00000574701 PIGNO95427 931 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 ADRB3P13945 408 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 GNSP15586 552 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 SERPINA4P29622 427 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 RGRP47804 291 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 SCNN1BP51168 640 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 AP1S1P61966 158 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 PPIDQ08752 370 aaKnown RBP24.58■■□□□ 1.53
LITAF-213ENST00000574701 CCDC6Q16204 474 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 CSRP2Q16527 193 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 CCDC181Q5TID7 509 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 PAF1Q8N7H5 531 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 C12orf50Q8NA57 414 aaPredicted RBP24.58■■□□□ 1.53
LITAF-213ENST00000574701 UBE2Q2Q8WVN8 375 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 MAML1Q92585 1016 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 P3H4Q92791 437 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 MGME1Q9BQP7 344 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 BRD8Q9H0E9 1235 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 MIR1-1HGQ9H1L0 117 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 SCUBE2Q9NQ36 999 aa24.58■■□□□ 1.53
LITAF-213ENST00000574701 PACSIN2Q9UNF0 486 aaPredicted RBP24.58■■□□□ 1.53
LITAF-213ENST00000574701 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.58■■□□□ 1.53
LITAF-213ENST00000574701 ANKRD36A6QL64 1941 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 C16orf96A6NNT2 1141 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 XPAP23025 273 aaPredicted RBP24.57■■□□□ 1.52
LITAF-213ENST00000574701 PEX5P50542 639 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 BCL2L1Q07817 233 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 AP1B1Q10567 949 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 PLA2G2CQ5R387 149 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 PEAR1Q5VY43 1037 aaPredicted RBP24.57■■□□□ 1.52
LITAF-213ENST00000574701 CEP76Q8TAP6 659 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 DNASE2BQ8WZ79 361 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 RAB7BQ96AH8 199 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 BIRC7Q96CA5 298 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 ZNF641Q96N77 438 aaPredicted RBP24.57■■□□□ 1.52
LITAF-213ENST00000574701 OLFM3Q96PB7 478 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 NT5MQ9NPB1 228 aa24.57■■□□□ 1.52
LITAF-213ENST00000574701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.56■■□□□ 1.52
LITAF-213ENST00000574701 MUSKO15146 869 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 ZNF806P0C7X5 589 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 MAOBP27338 520 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 PTPN7P35236 360 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 CCR5P51681 352 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 ITKQ08881 620 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 DUOXA1Q1HG43 343 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 RALGPS1Q5JS13 557 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 TEX26Q8N6G2 289 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 ALG3Q92685 438 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 NUDCD1Q96RS6 583 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 LGMNQ99538 433 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 HEMGNQ9BXL5 484 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 OSBPL8Q9BZF1 889 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 POLR1EQ9GZS1 481 aaKnown RBP24.56■■□□□ 1.52
LITAF-213ENST00000574701 SUV39H2Q9H5I1 410 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 PARD6AQ9NPB6 346 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 DKK3Q9UBP4 350 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 AMACRQ9UHK6 382 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 EIF2B4Q9UI10 523 aaKnown RBP24.56■■□□□ 1.52
LITAF-213ENST00000574701 EFR3BQ9Y2G0 817 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 TTLL3Q9Y4R7 772 aa24.56■■□□□ 1.52
LITAF-213ENST00000574701 VPS13AQ96RL7 3174 aa24.55■■□□□ 1.52
LITAF-213ENST00000574701 KHNYNO15037 678 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms