RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KIAA0895LQ68EN5 471 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3GQ6DHY5 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3CQ6IPX1 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 RWDD4Q6NW29 188 aaKnown RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 SCYL2Q6P3W7 929 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 NCEH1Q6PIU2 408 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 IL27RAQ6UWB1 636 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 ZNF783Q6ZMS7 281 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 MON1BQ7L1V2 547 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SLFN11Q7Z7L1 901 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 PIP4P1Q86T03 277 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 MCOLN2Q8IZK6 566 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3Q8IZP1 549 aaPredicted RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 AADATQ8N5Z0 425 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 DEFB124Q8NES8 71 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 OR7D4Q8NG98 312 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 OR2T34Q8NGX1 318 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 OR14C36Q8NHC7 312 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 FAM172AQ8WUF8 416 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 VCPIP1Q96JH7 1222 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 PSMB7Q99436 277 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 MAGEB5Q9BZ81 275 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 EDEM3Q9BZQ6 932 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 HAUS4Q9H6D7 363 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 RETREG1Q9H6L5 497 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 GAREM1Q9H706 876 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 C12orf49Q9H741 205 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TM9SF3Q9HD45 589 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 AIPL1Q9NZN9 384 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 VPS51Q9UID3 782 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SARDHQ9UL12 918 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 PPM1HQ9ULR3 514 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 HS3ST2Q9Y278 367 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 ADAMTS9Q9P2N4 1935 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 A0A1B0GVT2 93 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 A0A1W2PPC4 97 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 TCRBV5S1A1TA0A578 114 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 TMCO5BA8MYB1 307 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 FAM72CH0Y354 149 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 K7ERQ8 282 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CBX4O00257 560 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 EREGO14944 169 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ALOX15BO15296 676 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 EFSO43281 561 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 SMAD6O43541 496 aaKnown RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 SH3BP5O60239 455 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 GJB3O75712 270 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ZMPSTE24O75844 475 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 IGHV4-34P06331 123 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 PLEKP08567 350 aaPredicted RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 PTMSP20962 102 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 GLDCP23378 1020 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 RRM1P23921 792 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 PMLP29590 882 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CHRNA3P32297 505 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DRD3P35462 400 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 GRIA4P48058 902 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CCR5P51681 352 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ZNF143P52747 638 aaPredicted RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 RPL7AP62424 266 aaKnown RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 RACK1P63244 317 aaKnown RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 BNC1Q01954 994 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 GNA12Q03113 381 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CCDC15Q0P6D6 951 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 HNRNPDQ14103 355 aaKnown RBP7.59□□□□□ -1.19
NUP88-205ENST00000572809 ASIC2Q16515 512 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 KIF19Q2TAC6 998 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 HLA-BQ31612 363 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 FAM72AQ5TYM5 149 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 FAM72DQ6L9T8 149 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 RETSATQ6NUM9 610 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 PPP1R2P3Q6NXS1 205 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DNAJC24Q6P3W2 148 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DCUN1D2Q6PH85 259 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 LINGO4Q6UY18 593 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 LUZP1Q86V48 1076 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 FAM72BQ86X60 149 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DRC7Q8IY82 874 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CCDC185Q8N715 623 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DCAF4L2Q8NA75 395 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 TMIEQ8NEW7 156 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 OR2A12Q8NGT7 310 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 PIP4K2CQ8TBX8 421 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 NTAN1Q96AB6 310 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 SKA1Q96BD8 255 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CCDC114Q96M63 670 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 MCEEQ96PE7 176 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ORAI3Q9BRQ5 295 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 SYT11Q9BT88 431 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 EBF2Q9HAK2 575 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 CBX8Q9HC52 389 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ATP13A1Q9HD20 1204 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 PARVAQ9NVD7 372 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 TMEM248Q9NWD8 314 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ZNF212Q9UDV6 495 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 DNAI1Q9UI46 699 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 ANGPTL2Q9UKU9 493 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 TPX2Q9ULW0 747 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms