RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SETD3Q86TU7 594 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 NLRP14Q86W24 1093 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF366Q8N895 744 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 RTL3Q8N8U3 475 aaKnown RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 RAPGEF5Q92565 580 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 LMLNQ96KR4 655 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 RPL10LQ96L21 214 aaKnown RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 LGMNQ99538 433 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 FEM1AQ9BSK4 669 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 BTBD1Q9H0C5 482 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 PACSIN2Q9UNF0 486 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 CYSRT1A8MQ03 144 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 DFFAO00273 331 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 FGF10O15520 208 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-205ENST00000571028 TIMM44O43615 452 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 RAMP2O60895 175 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 GLDCP23378 1020 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 PRKCHP24723 683 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 CD27P26842 260 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ACSL1P33121 698 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ACVRL1P37023 503 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 CTSKP43235 329 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 MARCKSL1P49006 195 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 MAPKAPK2P49137 400 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 STK19P49842 368 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ST8SIA6P61647 398 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 KCNC4Q03721 635 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 DPYSL3Q14195 570 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 RTP5Q14D33 572 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 POLD3Q15054 466 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-205ENST00000571028 EIF4HQ15056 248 aaKnown RBP13.56□□□□□ -0.24
CCDC40-205ENST00000571028 PDK2Q15119 407 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ACCSLQ4AC99 568 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 BROXQ5VW32 411 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 LINGO4Q6UY18 593 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 RFX6Q8HWS3 928 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 CCDC50Q8IVM0 306 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 OR2T3Q8NH03 318 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 KRT35Q92764 455 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 CSPG4P5Q96PW8 444 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 MTG2Q9H4K7 406 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF212Q9UDV6 495 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 AMFRQ9UKV5 643 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 PYCARDQ9ULZ3 195 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
CCDC40-205ENST00000571028 CFAP46Q8IYW2 2715 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ILVBLA1L0T0 632 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 BNIP3LO60238 219 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 BRINP1O60477 761 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 DNTTP04053 509 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 DLDP09622 509 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 HTR7P34969 479 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 HCAR3P49019 387 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ARSEP51690 589 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 RHDQ02161 417 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 TLE3Q04726 772 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 SLC12A1Q13621 1099 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ENPP2Q13822 863 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 DPYSQ14117 519 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 KAZNQ674X7 775 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 KIAA0907Q7Z7F0 614 aaPredicted RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ARHGEF2Q92974 986 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 TTC17Q96AE7 1141 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 CALR3Q96L12 384 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 PSMB7Q99436 277 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 MAK16Q9BXY0 300 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 SLCO3A1Q9UIG8 710 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ERVW-1Q9UQF0 538 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 ACTL7AQ9Y615 435 aa13.55□□□□□ -0.24
CCDC40-205ENST00000571028 MYO18AQ92614 2054 aaKnown RBP13.55□□□□□ -0.24
CCDC40-205ENST00000571028 MUC22E2RYF6 1773 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 A0A1B0GTQ1 180 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 TTC34A8MYJ7 566 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 RASA4BC9J798 803 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 ZSCAN12O43309 604 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 RASA4O43374 803 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 MAP3K6O95382 1288 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms