RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HMCESQ96FZ2 354 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 GDAP1L1Q96MZ0 367 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 CALN1Q9BXU9 219 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 OSBPL1AQ9BXW6 950 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 HAUS4Q9H6D7 363 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZFR2Q9UPR6 939 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 FADS3Q9Y5Q0 445 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 DMXL2Q8TDJ6 3036 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 A6NNZ2 444 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 RASA4BC9J798 803 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 RASA4O43374 803 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 TSPAN6O43657 245 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 IGSF6O95976 241 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 GKP32189 559 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 PRKCIP41743 596 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 RHOAP61586 193 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 OGDHQ02218 1023 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 RAD51Q06609 339 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLHL30Q0D2K2 578 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 BNIP3Q12983 259 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZNF805Q5CZA5 627 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 ATXN7L2Q5T6C5 722 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 PLEKHA7Q6IQ23 1121 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 DHRS13Q6UX07 377 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 GCNT7Q6ZNI0 430 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZNF571Q7Z3V5 609 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 PTAR1Q7Z6K3 402 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 FAM174AQ8TBP5 190 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 ARHGEF26Q96DR7 871 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 NOL6Q9H6R4 1146 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 GPATCH2LQ9NWQ4 482 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
CTDNEP1-205ENST00000570828 SYCE3A1L190 88 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 C16orf96A6NNT2 1141 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 WASH4PA8MWX3 477 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 RFPL3O75679 317 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 RNF8O76064 485 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 FTLP02792 175 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 GZMAP12544 262 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 ABL2P42684 1182 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 CLDN2P57739 230 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 DNAJC3Q13217 504 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 SGCGQ13326 291 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 SERINC3Q13530 473 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 IQCB1Q15051 598 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 SMAD1Q15797 465 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 INO80DQ53TQ3 878 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 E4F1Q66K89 784 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 KYAT3Q6YP21 454 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 ABI3BPQ7Z7G0 1075 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 TRIM11Q96F44 468 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLHL32Q96NJ5 620 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 FUCA2Q9BTY2 467 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 SLC17A9Q9BYT1 436 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 EDEM3Q9BZQ6 932 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLHL11Q9NVR0 708 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 SCINQ9Y6U3 715 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 PKD1L2Q7Z442 2459 aa12.54□□□□□ -0.4
CTDNEP1-205ENST00000570828 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMEM191CA6NGB0 347 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 SRRM3A6NNA2 597 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■■□□□ 11.6
CTDNEP1-205ENST00000570828 FPGTO14772 594 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 DAPK3O43293 454 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 PRPSAP2O60256 369 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 PAK4O96013 591 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 C1SP09871 688 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 MYBL1P10243 752 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 CDK4P11802 303 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 HNF1BP35680 557 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 RABIFP47224 123 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 ACADVLP49748 655 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 Q6ZSR6 202 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 KANSL1Q7Z3B3 1105 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms