RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 CEP44Q9C0F1 390 aa15.39■□□□□ 0.05
RAB40B-203ENST00000570676 PREBQ9HCU5 417 aa15.39■□□□□ 0.05
RAB40B-203ENST00000570676 TMEM248Q9NWD8 314 aa15.39■□□□□ 0.05
RAB40B-203ENST00000570676 ACTL7AQ9Y615 435 aa15.39■□□□□ 0.05
RAB40B-203ENST00000570676 ALG6Q9Y672 507 aa15.39■□□□□ 0.05
RAB40B-203ENST00000570676 CXorf51AA0A1B0GTR3 108 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 KPNA3O00505 521 aaPredicted RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 FTCDO95954 541 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 PRNPP04156 253 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 RHOQP17081 205 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 MAT2AP31153 395 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 SLC1A1P43005 524 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 SSR1P43307 286 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 NXPH1P58417 271 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 SUZ12Q15022 739 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 PEX26Q7Z412 305 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 SLC35F6Q8N357 371 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 PCDH20Q8N6Y1 951 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 RHBDD1Q8TEB9 315 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 ARHGEF2Q92974 986 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 NCAPGQ9BPX3 1015 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 SPON2Q9BUD6 331 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 DMTF1Q9Y222 760 aa15.38■□□□□ 0.05
RAB40B-203ENST00000570676 APOBEC2Q9Y235 224 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 FCF1Q9Y324 198 aaKnown RBP15.38■□□□□ 0.05
RAB40B-203ENST00000570676 DFNA5O60443 496 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 LRCH4O75427 683 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 LEFTY1O75610 366 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 ATXN1LP0C7T5 689 aaKnown RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 EPHA8P29322 1005 aaPredicted RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 NUDT1P36639 197 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 GRK6P43250 576 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 PRAMEF14Q5SWL7 426 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 RWDD4Q6NW29 188 aaKnown RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 SCYL2Q6P3W7 929 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 NYAP1Q6ZVC0 841 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 PRPF39Q86UA1 669 aaKnown RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 PYROXD2Q8N2H3 581 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 ARFGAP1Q8N6T3 406 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 MFSD2AQ8NA29 543 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 KDF1Q8NAX2 398 aaPredicted RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 VOPP1Q96AW1 172 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 CDC6Q99741 560 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 RETREG1Q9H6L5 497 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 GDF3Q9NR23 364 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 IL36AQ9UHA7 158 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 DNAI1Q9UI46 699 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 AMFRQ9UKV5 643 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
RAB40B-203ENST00000570676 TRPM6Q9BX84 2022 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 IGF2RP11717 2491 aa15.37■□□□□ 0.05
RAB40B-203ENST00000570676 TMEM8BA6NDV4 472 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 TLR4O00206 839 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 RNGTTO60942 597 aaKnown RBP15.36■□□□□ 0.05
RAB40B-203ENST00000570676 TNNT1P13805 278 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 MIPP30301 263 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 PCK1P35558 622 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 ETFBP38117 255 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 CCNHP51946 323 aaPredicted RBP15.36■□□□□ 0.05
RAB40B-203ENST00000570676 TAS2R40P59535 323 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 SETMARQ53H47 684 aaPredicted RBP15.36■□□□□ 0.05
RAB40B-203ENST00000570676 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 ERN2Q76MJ5 926 aaKnown RBP15.36■□□□□ 0.05
RAB40B-203ENST00000570676 NT5DC3Q86UY8 548 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 IQCHQ86VS3 1027 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 GATAD2AQ86YP4 633 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 TMEM145Q8NBT3 493 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 SAP25Q8TEE9 199 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 WDR24Q96S15 920 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 HDAC8Q9BY41 377 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 NOL6Q9H6R4 1146 aaKnown RBP15.36■□□□□ 0.05
RAB40B-203ENST00000570676 PCSK1NQ9UHG2 260 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 ZMIZ1Q9ULJ6 1067 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
RAB40B-203ENST00000570676 A0A1W2PQU0 124 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 YKT6O15498 198 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 PRPSAP2O60256 369 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 RAMP2O60895 175 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 TCF4P15884 667 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 ITGB7P26010 798 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 L1CAMP32004 1257 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 GJC1P36383 396 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 RECQLP46063 649 aaPredicted RBP15.35■□□□□ 0.05
RAB40B-203ENST00000570676 ETF1P62495 437 aaKnown RBP15.35■□□□□ 0.05
RAB40B-203ENST00000570676 HADHQ16836 314 aaKnown RBP15.35■□□□□ 0.05
RAB40B-203ENST00000570676 ZNF284Q2VY69 593 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 CARD16Q5EG05 197 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 ARSIQ5FYB1 569 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 MEI1Q5TIA1 1274 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 NEK5Q6P3R8 708 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 PARS2Q7L3T8 475 aaKnown RBP15.35■□□□□ 0.05
RAB40B-203ENST00000570676 KANSL1Q7Z3B3 1105 aa15.35■□□□□ 0.05
RAB40B-203ENST00000570676 HORMAD1Q86X24 394 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms