RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GPR155Q7Z3F1 870 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 TTC7BQ86TV6 843 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 NLRP14Q86W24 1093 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 CACTIN-AS1Q8N1I8 211 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 PYROXD2Q8N2H3 581 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 OR2AP1Q8NGE2 309 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 VOPP1Q96AW1 172 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 ATXN7L3BQ96GX2 97 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 PCDHB18PQ96TA0 734 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 WRAP53Q9BUR4 548 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 DUSP23Q9BVJ7 150 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 C1QTNF2Q9BXJ5 285 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLC2Q9H0B6 622 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 NUP62CLQ9H1M0 184 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 GANQ9H2C0 597 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 SYNDIG1Q9H7V2 258 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 CPNE5Q9HCH3 593 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 GPR27Q9NS67 375 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 WDR70Q9NW82 654 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 PNMA8BQ9ULN7 279 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 HPCAL4Q9UM19 191 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 C2CD4BA6NLJ0 364 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 AGRPO00253 132 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ATXN7O15265 892 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 INSIG1O15503 277 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLK10O43240 276 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 TSPAN6O43657 245 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 AP1G1O43747 822 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 TMCC1O94876 653 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 POP4O95707 220 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 CELA2BP08218 269 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 RFC1P35251 1148 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 SOX5P35711 763 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 IGFALSP35858 605 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 MAPKAPK2P49137 400 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 DUSP3P51452 185 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 THOP1P52888 689 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ADKP55263 362 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 HDAC4P56524 1084 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PCBP4P57723 403 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PFN3P60673 137 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 SNRPD1P62314 119 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ISXQ2M1V0 245 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PRRT3Q5FWE3 981 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PERM1Q5SV97 790 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ACBD5Q5T8D3 534 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ARHGAP40Q5TG30 622 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAXCQ5TGI0 409 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZCCHC8Q6NZY4 707 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 SCYL2Q6P3W7 929 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PCSK4Q6UW60 755 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 GDPD4Q6W3E5 623 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ARCQ7LC44 396 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 DCP2Q8IU60 420 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PHACTR4Q8IZ21 702 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM181AQ8N9Y4 354 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF248Q8NDW4 579 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM172AQ8WUF8 416 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 ISG20Q96AZ6 181 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 CENPTQ96BT3 561 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 TBC1D31Q96DN5 1066 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 VCPIP1Q96JH7 1222 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 EXOC2Q96KP1 924 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 IL12RB2Q99665 862 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 MAGEH1Q9H213 219 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 NOL6Q9H6R4 1146 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 MBNL1Q9NR56 388 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 SEPT11Q9NVA2 429 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 TMEM248Q9NWD8 314 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 APOBEC3BQ9UH17 382 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 DACH1Q9UI36 760 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 SATB2Q9UPW6 733 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 NEU3Q9UQ49 428 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 COQ6Q9Y2Z9 468 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 UNC13CQ8NB66 2214 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 COL6A6A6NMZ7 2263 aa8.73□□□□□ -1.01
CTDNEP1-203ENST00000570385 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 CHD5Q8TDI0 1954 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 AREL1O15033 823 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KDELR3O43731 214 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 CREB3O43889 395 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TM7SF2O76062 418 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 PIGNO95427 931 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 GSRP00390 522 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 PRKCGP05129 697 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 GP1BAP07359 652 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KRT3P12035 628 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KRT10P13645 584 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TIMP2P16035 220 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TSHRP16473 764 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 GPD1P21695 349 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 EEF1GP26641 437 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 EPHB2P29323 1055 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 ETFBP38117 255 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 EIF4A3P38919 411 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms