RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CCDC112Q8NEF3 446 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ZMIZ2Q8NF64 920 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 CSGALNACT1Q8TDX6 532 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 CCDC51Q96ER9 411 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 LIN37Q96GY3 246 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ERO1AQ96HE7 468 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 FIZ1Q96SL8 496 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 GPHA2Q96T91 129 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 PCYT2Q99447 389 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TUBGCP2Q9BSJ2 902 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 NUP58Q9BVL2 599 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 BRD8Q9H0E9 1235 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 POLR3FQ9H1D9 316 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 SMYD2Q9NRG4 433 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TBC1D7Q9P0N9 293 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 NFU1Q9UMS0 254 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 FRMD4BQ9Y2L6 1034 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 DERAQ9Y315 318 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ZMYM2Q9UBW7 1377 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 PMS2P1A4D2B8 440 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 TBKBP1A7MCY6 615 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 E7EVH7 732 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 STX10O60499 249 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 DUSP11O75319 330 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 RASAL1O95294 804 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NR3C1P04150 777 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 CYP1A1P04798 512 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 HNRNPA1P09651 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 CYP2B6P20813 491 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 SFPQP23246 707 aaKnown RBP eCLIP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 RRM1P23921 792 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 MSNP26038 577 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NMT1P30419 496 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 ARL2P36404 184 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NPTX2P47972 431 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 MAN2A2P49641 1150 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PEX3P56589 373 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 KCNAB1Q14722 419 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PLCB4Q15147 1175 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NAA35Q5VZE5 725 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 LAYNQ6UX15 382 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 APTXQ7Z2E3 356 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 CNGA4Q8IV77 575 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 ZBTB8OSQ8IWT0 167 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NELFCDQ8IXH7 590 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PDPRQ8NCN5 879 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 TMEM161BQ8NDZ6 487 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PSPC1Q8WXF1 523 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 BORCS6Q96GS4 357 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 SLC46A1Q96NT5 459 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 SMOQ99835 787 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 SLC46A2Q9BY10 475 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 NFKBIZQ9BYH8 718 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 LMAN2LQ9H0V9 348 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 RNPEPQ9H4A4 650 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 XPNPEP1Q9NQW7 623 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PDGFCQ9NRA1 345 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 PCMTD2Q9NV79 361 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 DNMT3BQ9UBC3 853 aaKnown RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-222ENST00000570139 ADAM29Q9UKF5 820 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 GPR34Q9UPC5 381 aa7.45□□□□□ -1.22
CNOT1-222ENST00000570139 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 DENND3A2RUS2 1198 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 CCDC169A6NNP5 214 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 E9PLN8 166 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 SEPT4O43236 478 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 RGS10O43665 173 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 SEMA7AO75326 666 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 PIGRP01833 764 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TFRCP02786 760 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 CYBAP13498 195 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 PSMC2P35998 433 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 PBX1P40424 430 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 DRG2P55039 364 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 LOXL3P58215 753 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 UBXN1Q04323 297 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 MEA1Q16626 185 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 INTS8Q75QN2 995 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 DOK3Q7L591 496 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 ADGRE4PQ86SQ3 457 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TMEFF1Q8IYR6 380 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 ANKRD52Q8NB46 1076 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 ABHD5Q8WTS1 349 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TFAP2CQ92754 450 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 ERGIC2Q96RQ1 377 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TCF25Q9BQ70 676 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 VKORC1Q9BQB6 163 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NUDT22Q9BRQ3 303 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 C16orf70Q9BSU1 422 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TTPALQ9BTX7 342 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 FGFBP2Q9BYJ0 223 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 EDEM3Q9BZQ6 932 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 TTYH3Q9C0H2 523 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 UPF3AQ9H1J1 476 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms