RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SNX27Q96L92 541 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 HGH1Q9BTY7 390 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 C1orf21Q9H246 121 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 NEK6Q9HC98 313 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 TAB2Q9NYJ8 693 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 NINJ2Q9NZG7 142 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PCDHGC3Q9UN70 934 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SIT1Q9Y3P8 196 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ATXN7O15265 892 aaPredicted RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 GMFGO60234 142 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 H2AFYO75367 372 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 PDE5AO76074 875 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PAPLNO95428 1278 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 IL32P24001 234 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 KCNJ5P48544 419 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 GMFBP60983 142 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ROR2Q01974 943 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 TAP1Q03518 808 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 LMAN2Q12907 356 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ERV3-1Q14264 604 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 REXO1L1PQ8IX06 675 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SLC43A2Q8N370 569 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SLC35G2Q8TBE7 412 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 NUP85Q9BW27 656 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 LGR4Q9BXB1 951 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 BHMT2Q9H2M3 363 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 TMEM134Q9H6X4 195 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PNPLA8Q9NP80 782 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 EHD3Q9NZN3 535 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 KIF17Q9P2E2 1029 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 TFR2Q9UP52 801 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 USH1CQ9Y6N9 552 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 KIAA1217Q5T5P2 1943 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 MSH4O15457 936 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 GFRA3O60609 400 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 GAS8O95995 478 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 LMNAP02545 664 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 QDPRP09417 244 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SLC11A2P49281 568 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 NKX3-2P78367 333 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 CTTNQ14247 550 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 TBCELQ5QJ74 424 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 C9orf50Q5SZB4 431 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ANKRD54Q6NXT1 300 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 POTEGQ6S5H5 508 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 FAM71DQ8N9W8 422 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 TMEM40Q8WWA1 233 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PLD4Q96BZ4 506 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 CDH7Q9ULB5 785 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PCDHB10Q9UN67 800 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 PLAGL2Q9UPG8 496 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 MAPRE3Q9UPY8 281 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SNX9Q9Y5X1 595 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 BLACEA4D250 179 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 EPHB6O15197 1021 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TYMPP19971 482 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 RPA1P27694 616 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CASP6P55212 293 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TAP2Q03519 686 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TSTA3Q13630 321 aaPredicted RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 SPATS1Q496A3 300 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 IRAK1BP1Q5VVH5 260 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 PM20D1Q6GTS8 502 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 PAPD4Q6PIY7 484 aaKnown RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 TRIM65Q6PJ69 517 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TMC5Q6UXY8 1006 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 RAD9BQ6WBX8 426 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TRIM72Q6ZMU5 477 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TAGAPQ8N103 731 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 LARP4BQ92615 738 aaKnown RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 TRIM43Q96BQ3 446 aaPredicted RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 OTUB2Q96DC9 234 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 FAM124BQ9H5Z6 455 aaPredicted RBP6.74□□□□□ -1.33
SMG1-217ENST00000569764 WNT16Q9UBV4 365 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 PTPRFP10586 1907 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CYP3A7-CYP3A51PA0A087WV96 503 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 A0A0B4J269 797 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 A0A1W2PRV1 198 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 SNTNA6NMZ2 147 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TMX2-CTNND1H3BSU7 103 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 IL10P22301 178 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CYP3A7P24462 503 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 KLC1Q07866 573 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CYP2A13Q16696 494 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.74□□□□□ -1.33
SMG1-217ENST00000569764 HSDL1Q3SXM5 330 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TCP11X2Q5H9J9 407 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 MIIPQ5JXC2 388 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 FAM26FQ5R3K3 315 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 GRAMD4Q6IC98 578 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TRIM67Q6ZTA4 783 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CATSPER3Q86XQ3 398 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CCNYL1Q8N7R7 359 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 TMEM143Q96AN5 459 aa6.74□□□□□ -1.33
SMG1-217ENST00000569764 C18orf8Q96DM3 657 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms