RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PPP3CCP48454 512 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 LBX1P52954 281 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 WNT3AP56704 352 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TMPRSS15P98073 1019 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 EFEMP1Q12805 493 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SF3A3Q12874 501 aaKnown RBP eCLIP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 DUSP4Q13115 394 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 OLIG2Q13516 323 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SERINC3Q13530 473 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CHI3L2Q15782 390 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TCTN1Q2MV58 587 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 USP41Q3LFD5 358 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PPM1JQ5JR12 505 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 RTP2Q5QGT7 225 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MARC1Q5VT66 337 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SDHAF4Q5VUM1 108 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CES4AQ5XG92 561 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TPGS2Q68CL5 300 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ALG1LQ6GMV1 187 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 KIAA0930Q6ICG6 404 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 C16orf46Q6P387 395 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CES3Q6UWW8 571 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SLC39A5Q6ZMH5 540 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TAS1R1Q7RTX1 841 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CCDC91Q7Z6B0 441 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TBC1D1Q86TI0 1168 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 KCNMB4Q86W47 210 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ZC3HC1Q86WB0 502 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CEP57Q86XR8 500 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 LMNTD2Q8IXW0 634 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TMEM151AQ8N4L1 468 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 C2CD4AQ8NCU7 369 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PPHLN1Q8NEY8 458 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SPATA22Q8NHS9 363 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CFAP61Q8NHU2 1237 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF461Q8TAF7 563 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ARRDC2Q8TBH0 407 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 WNT2BQ93097 391 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 IGSF8Q969P0 613 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SLC7A6OSQ96CW6 309 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ERP27Q96DN0 273 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PTCD3Q96EY7 689 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 HMCESQ96FZ2 354 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF419Q96HQ0 510 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 RAB3IPQ96QF0 476 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 AGAP2Q99490 1192 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 GPR22Q99680 433 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 C1QTNF1Q9BXJ1 281 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 C1QTNF2Q9BXJ5 285 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TMEM120AQ9BXJ8 343 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CRISPLD1Q9H336 500 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 NPHS2Q9NP85 383 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SNX15Q9NRS6 342 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PCMTD2Q9NV79 361 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PIH1D1Q9NWS0 290 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TMEM216Q9P0N5 145 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 COPG2Q9UBF2 871 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 AFF4Q9UHB7 1163 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ZFP69BQ9UJL9 534 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MID2Q9UJV3 735 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 DNMT3LQ9UJW3 386 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 NUDT5Q9UKK9 219 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PATJQ8NI35 1801 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 A0A096LPK6 155 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 A0A0G2JND7 137 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 HEATR9A2RTY3 570 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TBKBP1A7MCY6 615 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TMEM114B3SHH9 223 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TARM1B6A8C7 271 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 F5H423 210 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 G3V2L1 256 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 H3BNC9 293 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 J3KR12 359 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF195O14628 629 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 SLC7A4O43246 635 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 FZD6O60353 706 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 ACSL4O60488 711 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TLR5O60602 858 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 PQBP1O60828 265 aaKnown RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TRIM13O60858 407 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 RAMP2O60895 175 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 CNTN5O94779 1100 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 SNUPNO95149 360 aaKnown RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 KLHL2O95198 593 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 ATP6V1G2O95670 118 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 MOCS2O96007 188 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 SERPINA6P08185 405 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 KRT16P08779 473 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 MYL2P10916 166 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 RALBP11234 206 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 HMGA1P17096 107 aaKnown RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 PAMP19021 973 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 TACR2P21452 398 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 CALB2P22676 271 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 CCND1P24385 295 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 ARNTP27540 789 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 ATP5C1P36542 298 aaKnown RBP5.44□□□□□ -1.54
SF3B3-213ENST00000569687 SLC26A3P40879 764 aa5.44□□□□□ -1.54
SF3B3-213ENST00000569687 EIF1AXP47813 144 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms