RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CD248Q9HCU0 757 aa23.75■■□□□ 1.39
RAB40C-212ENST00000569575 RSPH14Q9UHP6 348 aa23.75■■□□□ 1.39
RAB40C-212ENST00000569575 PPM1HQ9ULR3 514 aa23.75■■□□□ 1.39
RAB40C-212ENST00000569575 ATG2BQ96BY7 2078 aa23.75■■□□□ 1.39
RAB40C-212ENST00000569575 MUSKO15146 869 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 EPOP01588 193 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 CXCL12P48061 93 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 NUMBP49757 651 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 GEMP55040 296 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 GDF10P55107 478 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 RPL26P61254 145 aaKnown RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 POLR2LP62875 67 aaKnown RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 BCL2L1Q07817 233 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 ZNF776Q68DI1 518 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 Q6ZS52 159 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 RYBPQ8N488 228 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 MMGT1Q8N4V1 131 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 LRRN4Q8WUT4 740 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 TADA1Q96BN2 335 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 ZNF419Q96HQ0 510 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 FAM129BQ96TA1 746 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 DKK3Q9UBP4 350 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 FAM153AQ9UHL3 310 aa23.74■■□□□ 1.39
RAB40C-212ENST00000569575 RPL26L1Q9UNX3 145 aaKnown RBP23.74■■□□□ 1.39
RAB40C-212ENST00000569575 KRT14P02533 472 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 C5AR1P21730 350 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 CD68P34810 354 aaPredicted RBP23.73■■□□□ 1.39
RAB40C-212ENST00000569575 TNNT3P45378 269 aaPredicted RBP23.73■■□□□ 1.39
RAB40C-212ENST00000569575 PPP1R7Q15435 360 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 CCDC70Q6NSX1 233 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 KLHL7Q8IXQ5 586 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 STK40Q8N2I9 435 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 CCDC110Q8TBZ0 833 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 KRT12Q99456 494 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 C10orf88Q9H8K7 445 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 NEU2Q9Y3R4 380 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 TTLL3Q9Y4R7 772 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 WASF2Q9Y6W5 498 aa23.73■■□□□ 1.39
RAB40C-212ENST00000569575 CCDC163A0A0D9SF12 145 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 SMAPO00193 183 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 NFKB1P19838 968 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 WASP42768 502 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 CDK16Q00536 496 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 MTAPQ13126 283 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 PTK6Q13882 451 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 GAS6Q14393 721 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 ATXN7L2Q5T6C5 722 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-212ENST00000569575 BRAT1Q6PJG6 821 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 GDPD4Q6W3E5 623 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 B4GALNT4Q76KP1 1039 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 PCGF5Q86SE9 256 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 NDUFAF2Q8N183 169 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 COL25A1Q9BXS0 654 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-212ENST00000569575 SUV39H2Q9H5I1 410 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 NOD2Q9HC29 1040 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 EBF1Q9UH73 591 aa23.72■■□□□ 1.39
RAB40C-212ENST00000569575 EVLQ9UI08 416 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-212ENST00000569575 AP3B1O00203 1094 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 HTRA2O43464 458 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 GPR37L1O60883 481 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 DCNP07585 359 aaKnown RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 RPL22P35268 128 aaKnown RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 PTGIRP43119 386 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 RGRP47804 291 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 MAXP61244 160 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 SATB1Q01826 763 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 TTC31Q49AM3 519 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 ZNF805Q5CZA5 627 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 TMEM92Q6UXU6 159 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 TMPRSS6Q8IU80 811 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 ZNF366Q8N895 744 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 TSTD1Q8NFU3 115 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 PRCCQ92733 491 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 SRPK1Q96SB4 655 aaKnown RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 ADGRE3Q9BY15 652 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 ZDHHC6Q9H6R6 413 aa23.71■■□□□ 1.39
RAB40C-212ENST00000569575 EIF2B3Q9NR50 452 aaKnown RBP23.71■■□□□ 1.39
RAB40C-212ENST00000569575 TSPAN11A1L157 253 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 BNIP3LO60238 219 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 APBB3O95704 486 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 PDGFBP01127 241 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-212ENST00000569575 ITGB7P26010 798 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 COPAP53621 1224 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 SKOR1P84550 965 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 DSC2Q02487 901 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 NIPAL4Q0D2K0 466 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 SEMA5AQ13591 1074 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 CST6Q15828 149 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 ARSIQ5FYB1 569 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 USP30Q70CQ3 517 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 LINC00523Q86TU6 105 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 PRPF39Q86UA1 669 aaKnown RBP23.7■■□□□ 1.38
RAB40C-212ENST00000569575 KBTBD6Q86V97 674 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 BBOF1Q8ND07 529 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 PIP4K2CQ8TBX8 421 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 RAB7BQ96AH8 199 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 ECHDC3Q96DC8 303 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 EXOC2Q96KP1 924 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 C1QTNF1Q9BXJ1 281 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 CEP41Q9BYV8 373 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms