RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, human

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-225	ENST00000569487	RARS2	Q5T160	578 aa	Known RBP	18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	LIPM	Q5VYY2	423 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SEL1L3	Q68CR1	1132 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PIGZ	Q86VD9	579 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ABI1	Q8IZP0	508 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DSEL	Q8IZU8	1212 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SLC2A13	Q96QE2	648 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	BRD8	Q9H0E9	1235 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ELAC1	Q9H777	363 aa	Known RBP	18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CAB39L	Q9H9S4	337 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TMPRSS4	Q9NRS4	437 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	VTI1B	Q9UEU0	232 aa		18.89	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SLCO1B7	G3V0H7	640 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CLDN5	O00501	218 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	AIM2	O14862	343 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NCAM2	O15394	837 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DNAJB1	P25685	340 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TKT	P29401	623 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RPL9	P32969	192 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PITX1	P78337	314 aa	Predicted RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PPID	Q08752	370 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ADIG	Q0VDE8	80 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PRKAA1	Q13131	559 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ADGRE1	Q14246	886 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TLR1	Q15399	786 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DLG2	Q15700	870 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SLC5A9	Q2M3M2	681 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	LSM12	Q3MHD2	195 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	HSP90AA5P	Q58FG0	334 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PIGG	Q5H8A4	983 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	KCNMB4	Q86W47	210 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GCNA	Q96QF7	691 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SLC9A7	Q96T83	725 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ACE2	Q9BYF1	805 aa	Predicted RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GBA3	Q9H227	469 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NSMCE4A	Q9NXX6	385 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PLK2	Q9NYY3	685 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	COL4A6	Q14031	1691 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	KCNK1	O00180	336 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NRP1	O14786	923 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DNAJA2	O60884	412 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PPARG	P37231	505 aa	Predicted RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SLC11A1	P49279	550 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CYLC2	Q14093	348 aa	Predicted RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ANO4	Q32M45	955 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	INTS6L	Q5JSJ4	861 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TICAM1	Q8IUC6	712 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NPAS4	Q8IUM7	802 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TP53INP2	Q8IXH6	220 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PGAM4	Q8N0Y7	254 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DNAAF3	Q8N9W5	541 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ADCY4	Q8NFM4	1077 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DLG3	Q92796	817 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NTAN1	Q96AB6	310 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	VPS39	Q96JC1	886 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PGLYRP2	Q96PD5	576 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GPR22	Q99680	433 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	HNRNPAB	Q99729	332 aa	Known RBP	18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	C1QTNF1	Q9BXJ1	281 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487	DUSP16	Q9BY84	665 aa		18.88	■□□□□ 0.61
KLHDC4-225	ENST00000569487		M0QYT0	321 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PDLIM1	O00151	329 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	MTSS1	O43312	755 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	USP12	O75317	370 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CAPNS1	P04632	268 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CHRNG	P07510	517 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RFTN1	Q14699	578 aa	Predicted RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SATL1	Q86VE3	508 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TMEM151A	Q8N4L1	468 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TOP6BL	Q8N6T0	577 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RSPH1	Q8WYR4	309 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	KCTD13	Q8WZ19	329 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NDRG1	Q92597	394 aa	Known RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TNIP3	Q96KP6	325 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	LRGUK	Q96M69	825 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NDN	Q99608	321 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RHOBTB2	Q9BYZ6	727 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	WDR55	Q9H6Y2	383 aa	Predicted RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CRTAC1	Q9NQ79	661 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RIMS3	Q9UJD0	308 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	TRHDE	Q9UKU6	1024 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	CHD7	Q9P2D1	2997 aa		18.87	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GOLGA8Q	A0A0J9YX86	632 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GOLGA8O	A6NCC3	632 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GOLGA8N	F8WBI6	632 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GABRD	O14764	452 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	GRID2	O43424	1007 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	ERCC2	P18074	760 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	RPL5	P46777	297 aa	Known RBP	18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	HCAR3	P49019	387 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	THOP1	P52888	689 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	WDR5	P61964	334 aa	Known RBP	18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SCAP	Q12770	1279 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	SEMA3B	Q13214	749 aa		18.86	■□□□□ 0.61
KLHDC4-225	ENST00000569487	FLOT2	Q14254	428 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms