RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 FAM214BQ7L5A3 538 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 C14orf80Q86SX3 495 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 UNC93AQ86WB7 457 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 TRIM69Q86WT6 500 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 PTRH1Q86Y79 214 aaKnown RBP6.07□□□□□ -1.44
CDH13-212ENST00000569144 ARHGAP18Q8N392 663 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 C12orf29Q8N999 325 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 TMEM145Q8NBT3 493 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 WDR48Q8TAF3 677 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 ARRDC3Q96B67 414 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 TMA16Q96EY4 203 aaKnown RBP6.07□□□□□ -1.44
CDH13-212ENST00000569144 MRGPRX3Q96LB0 322 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 FUCA2Q9BTY2 467 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 FGFBP2Q9BYJ0 223 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 SDCBP2Q9H190 292 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 FAM49BQ9NUQ9 324 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 PLEKHB1Q9UF11 243 aaPredicted RBP6.07□□□□□ -1.44
CDH13-212ENST00000569144 ANAPC2Q9UJX6 822 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 KIF3AQ9Y496 699 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 MYH10P35580 1976 aa6.07□□□□□ -1.44
CDH13-212ENST00000569144 COL27A1Q8IZC6 1860 aaPredicted RBP6.07□□□□□ -1.44
CDH13-212ENST00000569144 LRRK2Q5S007 2527 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 ITIH6Q6UXX5 1313 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 EME2A4GXA9 379 aaPredicted RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 PLD2O14939 933 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 PLRG1O43660 514 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 STX6O43752 255 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CLSTN1O94985 981 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CEACAM5P06731 702 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 SRPRAP08240 638 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 P4HA1P13674 534 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 TRIM21P19474 475 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 CSKP41240 450 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 SGSHP51688 502 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 NDST1P52848 882 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 PDX1P52945 283 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CYP24A1Q07973 514 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 EIF3IQ13347 325 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 TGIF1Q15583 401 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CDKN3Q16667 212 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 POM121L1PQ3SYA9 428 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 TMEM201Q5SNT2 666 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 MANEAQ5SRI9 462 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 ADGRF1Q5T601 910 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 XP32Q5T750 250 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 GUSBP11Q6P575 273 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 STXBP4Q6ZWJ1 553 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 RSRC2Q7L4I2 434 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 EFL1Q7Z2Z2 1120 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 SPATA20Q8TB22 786 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 WFDC5Q8TCV5 224 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 HTR3CQ8WXA8 447 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CCDC127Q96BQ5 260 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CYFIP2Q96F07 1278 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 EAF1Q96JC9 268 aaPredicted RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 LMLNQ96KR4 655 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 NT5C1AQ9BXI3 368 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 SEPT10Q9P0V9 454 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 HMGXB4Q9UGU5 601 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 KLHL3Q9UH77 587 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 TUBD1Q9UJT1 453 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 LIMCH1Q9UPQ0 1083 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 ERVW-1Q9UQF0 538 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 CA5BQ9Y2D0 317 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 HBS1LQ9Y450 684 aaKnown RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 PCDHB14Q9Y5E9 798 aa6.06□□□□□ -1.44
CDH13-212ENST00000569144 ARID1BQ8NFD5 2236 aaPredicted RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 USP9YO00507 2555 aaPredicted RBP6.06□□□□□ -1.44
CDH13-212ENST00000569144 NOTCH2Q04721 2471 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 SPTAN1Q13813 2472 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 CPED1A4D0V7 1026 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 TTC34A8MYJ7 566 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 NVLO15381 856 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 TBL1XO60907 577 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 RTN2O75298 545 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 NEBLO76041 1014 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 BMP15O95972 392 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 WNT11O96014 354 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 IL1BP01584 269 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 PRNPP04156 253 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 IDEP14735 1019 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 UGT1A5P35504 534 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 AP3M2P53677 418 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 HNRNPKP61978 463 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDH13-212ENST00000569144 YWHAGP61981 247 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDH13-212ENST00000569144 CYP4F2P78329 520 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 KCNAB2Q13303 367 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 BIRC3Q13489 604 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 ELAVL3Q14576 367 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 NR0B2Q15466 257 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 IFI16Q16666 785 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 MCTP1Q6DN14 999 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 CRTC1Q6UUV9 634 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 RAB11FIP2Q7L804 512 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 DSG4Q86SJ6 1040 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 MFN1Q8IWA4 741 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 STK40Q8N2I9 435 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms