RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SOBPA7XYQ1 873 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 GLUD1P00367 558 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 C8AP07357 584 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 NIPAL4Q0D2K0 466 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF177Q13360 481 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 SPARCL1Q14515 664 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 PDE12Q6L8Q7 609 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 CES5AQ6NT32 575 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 TIFABQ6ZNK6 161 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 OTOP3Q7RTS5 596 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 TMEM150AQ86TG1 271 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 PRPF39Q86UA1 669 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 IMP4Q96G21 291 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 TCF25Q9BQ70 676 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 KIFC1Q9BW19 673 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 FSD1LQ9BXM9 530 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 ARNT2Q9HBZ2 717 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 PPANQ9NQ55 473 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 MKS1Q9NXB0 559 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 LSM7Q9UK45 103 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 CDV3Q9UKY7 258 aaKnown RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 RPS6KL1Q9Y6S9 549 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 FAM169AQ9Y6X4 670 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 FAM208BQ5VWN6 2430 aa14.81□□□□□ -0.04
COMMD4-221ENST00000567935 OBSL1O75147 1896 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 GOLGA6L7A0A1B0GV03 622 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 TYROBPO43914 113 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 KRT4P19013 534 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 SDHBP21912 280 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 CES1P23141 567 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 DDX6P26196 483 aaKnown RBP eCLIP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 SLC6A4P31645 630 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 CA8P35219 290 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ADRA1AP35348 466 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 SLC7A9P82251 487 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 GNA12Q03113 381 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 SLC18A2Q05940 514 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 LAMB3Q13751 1172 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ANKRD20A4Q4UJ75 823 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 PCID2Q5JVF3 399 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF354CQ86Y25 554 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 FAM217AQ8IXS0 508 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 MRPL43Q8N983 215 aaKnown RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 LEMD2Q8NC56 503 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 HJURPQ8NCD3 748 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ACMSDQ8TDX5 336 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 CKAP2Q8WWK9 683 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 MRRFQ96E11 262 aaKnown RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 CERS2Q96G23 380 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 MAGEB18Q96M61 343 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 CCT8L2Q96SF2 557 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 PRKD2Q9BZL6 878 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 POLR1EQ9GZS1 481 aaKnown RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 RNF38Q9H0F5 515 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF334Q9HCZ1 680 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 TXNDC16Q9P2K2 825 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 DPP7Q9UHL4 492 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ZMYM5Q9UJ78 669 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 GGA2Q9UJY4 613 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 DUSP12Q9UNI6 340 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 TBC1D30Q9Y2I9 924 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 ZFP37Q9Y6Q3 630 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 DENND4CQ5VZ89 1909 aa14.8□□□□□ -0.04
COMMD4-221ENST00000567935 MTCL1Q9Y4B5 1905 aaKnown RBP14.8□□□□□ -0.04
COMMD4-221ENST00000567935 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 C2orf78A6NCI8 922 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 J3KR12 359 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 KDELR3O43731 214 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 KLKB1P03952 638 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 RHOCP08134 193 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 CREB1P16220 341 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 HDCP19113 662 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 CA4P22748 312 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 GABRR2P28476 465 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 HOXA9P31269 272 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 GP5P40197 560 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 MTHFRP42898 656 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ILF2Q12905 390 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF235Q14590 738 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 LBRQ14739 615 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ALG1LQ6GMV1 187 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 TRMT10BQ6PF06 316 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ELMSAN1Q6PJG2 1045 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 KDELC1Q6UW63 502 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 RANBP10Q6VN20 620 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 TMC8Q8IU68 726 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 C12orf76Q8N812 135 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ANKRD42Q8N9B4 389 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 BANPQ8N9N5 519 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 PPHLN1Q8NEY8 458 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 IPMKQ8NFU5 416 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 GABPB2Q8TAK5 448 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 DENND1AQ8TEH3 1009 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF473Q8WTR7 871 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms