RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	CAMK1G	Q96NX5	476 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	STK33	Q9BYT3	514 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	MIR1-1HG	Q9H1L0	117 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	NOL6	Q9H6R4	1146 aa	Known RBP	6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM204A	Q9H8W3	233 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	ERVW-1	Q9UQF0	538 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	TBC1D30	Q9Y2I9	924 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	PIKFYVE	Q9Y2I7	2098 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376	UNC13C	Q8NB66	2214 aa		6.64	□□□□□ -1.35
TCF4-233	ENST00000566376		A0A0D9SEW6	157 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	LOC100289279	A0A1B0GTE1	492 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	DRGX	A6NNA5	263 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	GOLGA8S	H3BPF8	625 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376		K7ERQ8	282 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	NPC1	O15118	1278 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	MID1	O15344	667 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	AP5Z1	O43299	807 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SMAD6	O43541	496 aa	Known RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CBFA2T3	O75081	653 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	ZMPSTE24	O75844	475 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CAPNS1	P04632	268 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CYBB	P04839	570 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SERPINF2	P08697	491 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SRC	P12931	536 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SPINK2	P20155	84 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	HOXD12	P35452	270 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CD97	P48960	835 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SLC11A2	P49281	568 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SULT1E1	P49888	294 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	LIG3	P49916	1009 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	PLK1	P53350	603 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	ARF5	P84085	180 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CDR2	Q01850	454 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	NME3	Q13232	169 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SHB	Q15464	509 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CCDC14	Q49A88	953 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	ANO6	Q4KMQ2	910 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FNDC3B	Q53EP0	1204 aa	Known RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	EFHC1	Q5JVL4	640 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CCDC183	Q5T5S1	534 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	AGBL4	Q5VU57	503 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	ADAMTSL4	Q6UY14	1074 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	KDM7A	Q6ZMT4	941 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	IRF2BP2	Q7Z5L9	587 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM124A	Q86V42	546 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	C11orf74	Q86VG3	221 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	NLRP14	Q86W24	1093 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM131B	Q86XD5	332 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM114A1	Q8IWE2	563 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	STK40	Q8N2I9	435 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	MINDY1	Q8N5J2	469 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	ARFGAP1	Q8N6T3	406 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	C12orf50	Q8NA57	414 aa	Predicted RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	DEFB124	Q8NES8	71 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	OR7D4	Q8NG98	312 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SLC30A5	Q8TAD4	765 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	CENPI	Q92674	756 aa	Predicted RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	BIRC7	Q96CA5	298 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SIPA1	Q96FS4	1042 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	FAM81B	Q96LP2	452 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	PEBP4	Q96S96	227 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	C11orf70	Q9BRQ4	267 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	YIPF2	Q9BWQ6	316 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	TRIM7	Q9C029	511 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	TKTL2	Q9H0I9	626 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	PABPC3	Q9H361	631 aa	Known RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	TMEM9B	Q9NQ34	198 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	MPP6	Q9NZW5	540 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	EIF2B4	Q9UI10	523 aa	Known RBP	6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	VPS51	Q9UID3	782 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	BTBD3	Q9Y2F9	522 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	KALRN	O60229	2985 aa		6.63	□□□□□ -1.35
TCF4-233	ENST00000566376	SNRNP200	O75643	2136 aa	Known RBP	6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CFAP46	Q8IYW2	2715 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	SPAAR	A0A1B0GVQ0	90 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376		A0A1W2PR77	199 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376		E9PAM4	449 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376		F5H5T6	163 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CAPN9	O14815	690 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CCP110	O43303	1012 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	ZNF217	O75362	1048 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	LSM8	O95777	96 aa	Known RBP	6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	RECK	O95980	971 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	APOE	P02649	317 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	TCF4	P15884	667 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CCR1	P32246	355 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	RFC1	P35251	1148 aa	Predicted RBP	6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	ADPRH	P54922	357 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	RPL7A	P62424	266 aa	Known RBP	6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	SHC2	P98077	582 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CDH18	Q13634	790 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	STARD3	Q14849	445 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CST6	Q15828	149 aa		6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	TPD52L1	Q16890	204 aa	Predicted RBP	6.62	□□□□□ -1.35
TCF4-233	ENST00000566376	CLEC16A	Q2KHT3	1053 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms