RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 SARM1Q6SZW1 724 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 GDPD4Q6W3E5 623 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 CYP4V2Q6ZWL3 525 aaPredicted RBP12.47□□□□□ -0.41
SPG7-211ENST00000565370 BBS5Q8N3I7 341 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 NSMCE1Q8WV22 266 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 PDFQ9HBH1 243 aa12.47□□□□□ -0.41
SPG7-211ENST00000565370 CWC15Q9P013 229 aaKnown RBP12.47□□□□□ -0.41
SPG7-211ENST00000565370 A0A1B0GTQ1 180 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 A0A1W2PR77 199 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
SPG7-211ENST00000565370 H0Y8X5 98 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TLR4O00206 839 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 SLC31A1O15431 190 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TSPAN6O43657 245 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PCDHGA12O60330 932 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PALMO75781 387 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TRIM16O95361 564 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 RARAP10276 462 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PRLRP16471 622 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 IL1R2P27930 398 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 GKP32189 559 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 MAN1A1P33908 653 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PAPOLAP51003 745 aaKnown RBP12.46□□□□□ -0.41
SPG7-211ENST00000565370 RENBPP51606 427 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 SUOXP51687 545 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 SLC25A11Q02978 314 aaKnown RBP12.46□□□□□ -0.41
SPG7-211ENST00000565370 IL10RBQ08334 325 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 ZNF235Q14590 738 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 ZNF284Q2VY69 593 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TMCO4Q5TGY1 634 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 RHOT2Q8IXI1 618 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 NPWQ8N729 165 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 FEM1CQ96JP0 617 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 BTBD6Q96KE9 485 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 EXOC2Q96KP1 924 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 KLHL32Q96NJ5 620 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 CDC6Q99741 560 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 MYOCQ99972 504 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 C1QTNF7Q9BXJ2 289 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 SLC39A8Q9C0K1 460 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 KLC2Q9H0B6 622 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 LHX3Q9UBR4 397 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 PCOLCE2Q9UKZ9 415 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 NENFQ9UMX5 172 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
SPG7-211ENST00000565370 MFHAS1Q9Y4C4 1052 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 FADS3Q9Y5Q0 445 aa12.46□□□□□ -0.41
SPG7-211ENST00000565370 SPAARA0A1B0GVQ0 90 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 A6NNZ2 444 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 PROSCO94903 275 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 WNT1P04628 370 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 KRT7P08729 469 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 SERPINA4P29622 427 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 HSPA9P38646 679 aaKnown RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 ABL2P42684 1182 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 CDH6P55285 790 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 SHC2P98077 582 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 IL9RQ01113 521 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 SGCGQ13326 291 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 TRIP6Q15654 476 aaKnown RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 ZFYVE27Q5T4F4 411 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 SEL1L3Q68CR1 1132 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 POLNQ7Z5Q5 900 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 PTAR1Q7Z6K3 402 aaPredicted RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 MAP7D3Q8IWC1 876 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 ARHGAP12Q8IWW6 846 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 DENND6BQ8NEG7 585 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 CXorf40AQ8TE69 158 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 KLK6Q92876 244 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 KLHDC7BQ96G42 594 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 ZNF599Q96NL3 588 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 CPEB1Q9BZB8 566 aaKnown RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 ERVMER34-1Q9H9K5 563 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 NHEJ1Q9H9Q4 299 aaPredicted RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 HAUS2Q9NVX0 235 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 DKK3Q9UBP4 350 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 SEPT3Q9UH03 358 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 IPO11Q9UI26 975 aaKnown RBP12.45□□□□□ -0.42
SPG7-211ENST00000565370 CHD6Q8TD26 2715 aa12.45□□□□□ -0.42
SPG7-211ENST00000565370 J3KR12 359 aa12.44□□□□□ -0.42
SPG7-211ENST00000565370 ITGAVP06756 1048 aa12.44□□□□□ -0.42
SPG7-211ENST00000565370 THEGLP0DJG4 465 aa12.44□□□□□ -0.42
SPG7-211ENST00000565370 TCF4P15884 667 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms