RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 LARGE1O95461 756 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 CLDN7O95471 211 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 NAGAP17050 411 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 TCEA1P23193 301 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 GSTM2P28161 218 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 AMTP48728 403 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 AK2P54819 239 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 CDH12P55289 794 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 DLX5P56178 289 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SEC61A1P61619 476 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 ZNF672Q499Z4 452 aaPredicted RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 C5orf22Q49AR2 442 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 OTUD3Q5T2D3 398 aaPredicted RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 VWA5B1Q5TIE3 1220 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 C8orf82Q6P1X6 216 aaPredicted RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 GSG1LQ6UXU4 331 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SYNE3Q6ZMZ3 975 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 RASGRP2Q7LDG7 609 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 GATAD2AQ86YP4 633 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SYTL1Q8IYJ3 562 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 ENDOVQ8N8Q3 282 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SCAMP5Q8TAC9 235 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 BICD2Q8TD16 824 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SLC35F5Q8WV83 523 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 ARRDC3Q96B67 414 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 ABHD8Q96I13 439 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SGCZQ96LD1 299 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 INPP4AQ96PE3 977 aaPredicted RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 GFM1Q96RP9 751 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 PKP4Q99569 1192 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 BRD8Q9H0E9 1235 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 DDX31Q9H8H2 851 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SDF2L1Q9HCN8 221 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 OBP2BQ9NPH6 170 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 LIN7CQ9NUP9 197 aaKnown RBP2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 NFU1Q9UMS0 254 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 ABCA3Q99758 1704 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 SBF1O95248 1867 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 CCDC88AQ3V6T2 1871 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 FYCO1Q9BQS8 1478 aa2.65□□□□□ -1.99
SUB1P3-201ENST00000564581 EFCAB6Q5THR3 1501 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 PLCH1Q4KWH8 1693 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 LOC102724159A0A0B4J2E5 919 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 ANO9A1A5B4 782 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 TARSL2A2RTX5 802 aaKnown RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 LGALS16A8MUM7 142 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 ITM2AO43736 263 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 KCNJ13O60928 360 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 SOX30O94993 753 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 AFPP02771 609 aaKnown RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 UMODP07911 640 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 AVPR2P30518 371 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 TUBA1BP68363 451 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 SPARCL1Q14515 664 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 PWP2Q15269 919 aaKnown RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 SF3B4Q15427 424 aaKnown RBP eCLIP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 HLFQ16534 295 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 KIF19Q2TAC6 998 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 TRIM60Q495X7 471 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 GALNTL6Q49A17 601 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 MEX3BQ6ZN04 569 aaKnown RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 MON1BQ7L1V2 547 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 SRLQ86TD4 932 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 PALB2Q86YC2 1186 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 MUC20Q8N307 709 aaPredicted RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 LILRB1Q8NHL6 650 aaPredicted RBP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 SPATA20Q8TB22 786 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 GPT2Q8TD30 523 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 C8orf48Q96LL4 319 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 NODALQ96S42 347 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 NPAS1Q99742 590 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 MYD88Q99836 296 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 CLPBQ9H078 707 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 DONSONQ9NYP3 566 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 DAPP1Q9UN19 280 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 ARHGAP31Q2M1Z3 1444 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 CEP152O94986 1710 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 QSER1Q2KHR3 1735 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 USP32Q8NFA0 1604 aa2.64□□□□□ -1.99
SUB1P3-201ENST00000564581 ADGRB3O60242 1522 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 PLEKHG1Q9ULL1 1385 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 NTN3O00634 580 aaPredicted RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 BUB3O43684 328 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 DDAH2O95865 285 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 IGLV2-11P01706 119 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 SNRNP70P08621 437 aaKnown RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 NBPF7P0C2Y1 421 aaPredicted RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 PRKCHP24723 683 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 RFC1P35251 1148 aaPredicted RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 PCP4P48539 62 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 CTCFP49711 727 aaPredicted RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 OAZ1P54368 228 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 HILS1P60008 231 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 POU5F1BQ06416 359 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 ALKBH1Q13686 389 aaKnown RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 IDI1Q13907 227 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 CTTNQ14247 550 aaKnown RBP2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 STARD3Q14849 445 aa2.63□□□□□ -1.99
SUB1P3-201ENST00000564581 RPS6KA2Q15349 733 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms