RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 FBXO39Q8N4B4 442 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 CNTD1Q8N815 330 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 PTGR2Q8N8N7 351 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-209ENST00000564068 CMASQ8NFW8 434 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-209ENST00000564068 CANT1Q8WVQ1 401 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 ELMO1Q92556 727 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 NDRG1Q92597 394 aaKnown RBP12.73□□□□□ -0.37
COMMD4-209ENST00000564068 UNC93B1Q9H1C4 597 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 TBC1D13Q9NVG8 400 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 TRHDEQ9UKU6 1024 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 TRAF6Q9Y4K3 522 aa12.73□□□□□ -0.37
COMMD4-209ENST00000564068 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FAM20BO75063 409 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 CLIC3O95833 236 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 LRRC74AQ0VAA2 488 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 SV2CQ496J9 727 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 ANKS6Q68DC2 871 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 ARHGAP36Q6ZRI8 547 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 SLCO6A1Q86UG4 719 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 CUZD1Q86UP6 607 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 ZBTB8BQ8NAP8 495 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 TLE6Q9H808 572 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FANCEQ9HB96 536 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FAM50BQ9Y247 325 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 HES2Q9Y543 173 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 U3KQV3 271 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 RAD51BO15315 384 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 HK2P52789 917 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 ARMC4Q5T2S8 1044 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 OGFOD2Q6N063 350 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 TFAP2DQ7Z6R9 452 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 EID3Q8N140 333 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FIZ1Q96SL8 496 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 MRPL57Q9BQC6 102 aaKnown RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 SYT11Q9BT88 431 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 PNMA8BQ9ULN7 279 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 TMEM247A6NEH6 219 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 IRF6O14896 467 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 MFSD11O43934 449 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 F9P00740 461 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 LTA4HP09960 611 aaKnown RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 LINC00032P0C843 101 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 SLC2A4P14672 509 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 PRDX6P30041 224 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 LIMK2P53671 638 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 RAD51Q06609 339 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 INAQ16352 499 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 TIGD2Q4W5G0 525 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 TMEM26Q6ZUK4 368 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 FSTL5Q8N475 847 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-209ENST00000564068 AP5M1Q9H0R1 490 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
COMMD4-209ENST00000564068 GLP2RO95838 553 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 DBTP11182 482 aaKnown RBP12.71□□□□□ -0.37
COMMD4-209ENST00000564068 CPB1P15086 417 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 GJA8P48165 433 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TRAF3Q13114 568 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 KCNJ11Q14654 390 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 PIGZQ86VD9 579 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 NAT16Q8N8M0 369 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 ACOX2Q99424 681 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TRMT6Q9UJA5 497 aaKnown RBP12.71□□□□□ -0.37
COMMD4-209ENST00000564068 NUDT5Q9UKK9 219 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-209ENST00000564068 ANKRD12Q6UB98 2062 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TMEM233B4DJY2 109 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 MED26O95402 600 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 POU1F1P28069 291 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 ALDH4A1P30038 563 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TNK2Q07912 1038 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 METTL6Q8TCB7 284 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 VPS33AQ96AX1 596 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TBL1YQ9BQ87 522 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
COMMD4-209ENST00000564068 TRIM39Q9HCM9 518 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 HPS4Q9NQG7 708 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 RIPK3Q9Y572 518 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 PSAT1Q9Y617 370 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 SLC30A1Q9Y6M5 507 aa12.71□□□□□ -0.37
COMMD4-209ENST00000564068 PDZK1P1A8MUH7 402 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 EDIL3O43854 480 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 CYP2C9P11712 490 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 UBA1P22314 1058 aaKnown RBP12.71□□□□□ -0.38
COMMD4-209ENST00000564068 FBXO48Q5FWF7 155 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 PCID2Q5JVF3 399 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 PTRHD1Q6GMV3 140 aaKnown RBP12.71□□□□□ -0.38
COMMD4-209ENST00000564068 PAOXQ6QHF9 649 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.38
COMMD4-209ENST00000564068 TAMM41Q96BW9 452 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 C12orf43Q96C57 262 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms