RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CXorf51AA0A1B0GTR3 108 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 TLDC2A0PJX2 215 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 H3BQF6 201 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 RASGRF2O14827 1237 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 TPH1P17752 444 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 PSMC3P17980 439 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 CHRNA4P43681 627 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 SLCO1A2P46721 670 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 STK19P49842 368 aaPredicted RBP22.21■■□□□ 1.15
LINC01960-201ENST00000563759 SULT2A1Q06520 285 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 IHHQ14623 411 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 PARM1Q6UWI2 310 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 RANBP10Q6VN20 620 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 UNC5AQ6ZN44 842 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 CROCCP2Q86T23 111 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 SLC25A41Q8N5S1 370 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.21■■□□□ 1.15
LINC01960-201ENST00000563759 FGF14Q92915 247 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 TM6SF2Q9BZW4 377 aa22.21■■□□□ 1.15
LINC01960-201ENST00000563759 TICRRQ7Z2Z1 1910 aa22.2■■□□□ 1.15
LINC01960-201ENST00000563759 TCRBV9S1A1TA0A576 114 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 H3BQ06 376 aaPredicted RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 TRIM24O15164 1050 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 SMAD6O43541 496 aaKnown RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 GSTA2P09210 222 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 SP100P23497 879 aaPredicted RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 STX2P32856 288 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 NSUN2Q08J23 767 aaKnown RBP eCLIP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 SLC14A2Q15849 920 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 DENND5AQ6IQ26 1287 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 KRT222Q8N1A0 295 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 CPA6Q8N4T0 437 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 GSDMBQ8TAX9 411 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 FEM1CQ96JP0 617 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 HPS4Q9NQG7 708 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 FAM53CQ9NYF3 392 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 HS3ST2Q9Y278 367 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 POLR2EP19388 210 aaKnown RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ECT2LQ008S8 904 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 POU6F1Q14863 301 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 SLC1A5Q15758 541 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 GEN1Q17RS7 908 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ATXN7L2Q5T6C5 722 aaPredicted RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 MBLAC2Q68D91 279 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 MTSS1LQ765P7 747 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ADIPOR2Q86V24 386 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 C12orf40Q86WS4 652 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 TMEM109Q9BVC6 243 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 PLA2G2FQ9BZM2 168 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ROPN1BQ9BZX4 212 aaPredicted RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ACSS3Q9H6R3 686 aa22.2■■□□□ 1.14
LINC01960-201ENST00000563759 ROPN1Q9HAT0 212 aaPredicted RBP22.2■■□□□ 1.14
LINC01960-201ENST00000563759 OTOL1A6NHN0 477 aaPredicted RBP22.19■■□□□ 1.14
LINC01960-201ENST00000563759 TULP3O75386 442 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 POLBP06746 335 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 SRCP12931 536 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 OAS2P29728 719 aaKnown RBP22.19■■□□□ 1.14
LINC01960-201ENST00000563759 CDK18Q07002 472 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 NR1H3Q13133 447 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 KLHL38Q2WGJ6 581 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 RABGEF1Q9UJ41 708 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 FBXO10Q9UK96 956 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 RPS6KL1Q9Y6S9 549 aa22.19■■□□□ 1.14
LINC01960-201ENST00000563759 GOLGA8KD6RF30 607 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 RNF40O75150 1001 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 CRYMQ14894 314 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 RALGPS1Q5JS13 557 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 KIAA0907Q7Z7F0 614 aaPredicted RBP22.18■■□□□ 1.14
LINC01960-201ENST00000563759 ETFBKMTQ8IXQ9 262 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 WFIKKN2Q8TEU8 576 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 ARL8AQ96BM9 186 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 PKNOX2Q96KN3 472 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 CIPCQ9C0C6 399 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 ARNT2Q9HBZ2 717 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 TMBIM4Q9HC24 238 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 OGFRQ9NZT2 677 aa22.18■■□□□ 1.14
LINC01960-201ENST00000563759 BCCIPQ9P287 314 aaKnown RBP eCLIP22.18■■□□□ 1.14
LINC01960-201ENST00000563759 LOC285095A0A1B0GVY8 99 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 POC1B-GALNT4F8VUJ3 575 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 ECI2O75521 394 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 IGSF6O95976 241 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 HLA-DPA1P20036 260 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 CA4P22748 312 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 AP1S1P61966 158 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 RUNX3Q13761 415 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 GALNT3Q14435 633 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 EFTUD2Q15029 972 aaKnown RBP eCLIP22.17■■□□□ 1.14
LINC01960-201ENST00000563759 ACCSLQ4AC99 568 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SIRPB2Q5JXA9 342 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 STEAP4Q687X5 459 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 C22orf39Q6P5X5 142 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SH2D3CQ8N5H7 860 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 PPHLN1Q8NEY8 458 aaKnown RBP22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SUSD6Q92537 303 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 ZNF669Q96BR6 464 aaPredicted RBP22.17■■□□□ 1.14
LINC01960-201ENST00000563759 CYTH2Q99418 400 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TDRD1Q9BXT4 1180 aaKnown RBP22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TNKS2Q9H2K2 1166 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 PLAC1Q9HBJ0 212 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SOX13Q9UN79 622 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms