RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 RAB20Q9NX57 234 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 IL36AQ9UHA7 158 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 VPS51Q9UID3 782 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 TRAF3IP3Q9Y228 551 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 TBC1D30Q9Y2I9 924 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 FBXO21O94952 628 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CD19P15391 556 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 GTF2H1P32780 548 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 EIF4A3P38919 411 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 NASPP49321 788 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 HK3P52790 923 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 THOP1P52888 689 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 PPARDQ03181 441 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CUL2Q13617 745 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ELOCQ15369 112 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ARHGAP44Q17R89 818 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ALG11Q2TAA5 492 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CERCAMQ5T4B2 595 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 FAXCQ5TGI0 409 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 KCTD16Q68DU8 428 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 KRT39Q6A163 491 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 C22orf39Q6P5X5 142 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 MAMDC2Q7Z304 686 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CACNA2D3Q8IZS8 1091 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 FSTL5Q8N475 847 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 IL22RA1Q8N6P7 574 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ATP6V0D2Q8N8Y2 350 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 Q8N9G6 341 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 IQUBQ8NA54 791 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ATP11CQ8NB49 1132 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 TP53I13Q8NBR0 393 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 LINC00301Q8NCQ3 95 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CCDC150Q8NCX0 1101 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 PPP1R16AQ96I34 528 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 HSFY1Q96LI6 401 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 TAAR9Q96RI9 348 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 PPP1R9BQ96SB3 815 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 MIS12Q9H081 205 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 TNKS2Q9H2K2 1166 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 MAGEF1Q9HAY2 307 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 MBNL1Q9NR56 388 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 VPS28Q9UK41 221 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 GPR34Q9UPC5 381 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 ITM2BQ9Y287 266 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 FRMD4BQ9Y2L6 1034 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 B3GALT1Q9Y5Z6 326 aa7.85□□□□□ -1.15
HERPUD1-206ENST00000563343 LOC101059948A0A1B0GTJ6 334 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RNF225M0QZC1 329 aaPredicted RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TOR1BO14657 336 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 B4GAT1O43505 415 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TSPAN6O43657 245 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RAD1O60671 282 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 EIF5BO60841 1220 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 DDAH2O95865 285 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TRUB2O95900 331 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 ALPIP09923 528 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 PRKAR1AP10644 381 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 NR2F2P24468 414 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 GRNP28799 593 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 GGCXP38435 758 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 NUCB2P80303 420 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 B4GALNT1Q00973 533 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 SGCGQ13326 291 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 AUHQ13825 339 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 HLTFQ14527 1009 aaKnown RBP eCLIP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TCEA2Q15560 299 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 CNGA2Q16280 664 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 CRTC2Q53ET0 693 aaPredicted RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RABGAP1LQ5R372 815 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 PHF19Q5T6S3 580 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 SRRM1Q8IYB3 904 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 FAM186BQ8IYM0 893 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 GRAMD1CQ8IYS0 662 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RCBTB1Q8NDN9 531 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 FBXL13Q8NEE6 735 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 APOBEC4Q8WW27 367 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RNF34Q969K3 372 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 TSACCQ96A04 125 aaPredicted RBP7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 RDH14Q9HBH5 336 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 KIAA1257Q9ULG3 409 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 VANGL2Q9ULK5 521 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 COQ4Q9Y3A0 265 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 CROCCQ5TZA2 2017 aa7.84□□□□□ -1.15
HERPUD1-206ENST00000563343 A0A0D9SEW6 157 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 IGHV5-10-1A0A0J9YXX1 117 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 M0QYT0 321 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 M0QYV0 167 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 HGSO14964 777 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 AREL1O15033 823 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CAPN5O15484 640 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 POLR2DO15514 142 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CALUO43852 315 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms