RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 KIAA1524Q8TCG1 905 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 KRT35Q92764 455 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PSKH2Q96QS6 385 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 HEPHQ9BQS7 1158 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TM6SF2Q9BZW4 377 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 BTBD1Q9H0C5 482 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 NEUROG2Q9H2A3 272 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SGK2Q9HBY8 427 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 FBXL12Q9NXK8 326 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 HECAQ9UBI9 543 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 LHX3Q9UBR4 397 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 UBA2Q9UBT2 640 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TRIM10Q9UDY6 481 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PCDHA3Q9Y5H8 950 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 EP300Q09472 2414 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SDK1Q7Z5N4 2213 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 FAM186AA6NE01 2351 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 C1QTNF3-AMACRE9PGA6 284 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 DFFAO00273 331 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SLC7A4O43246 635 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 BNIP3LO60238 219 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 LEFTY1O75610 366 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 POP4O95707 220 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 GARSP41250 739 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 RECQLP46063 649 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CSNK1DP48730 415 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 GBE1Q04446 702 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 NSUN2Q08J23 767 aaKnown RBP eCLIP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SLC10A7Q0GE19 358 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CNTN1Q12860 1018 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SFSWAPQ12872 951 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 MYLK3Q32MK0 819 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 NT5DC3Q86UY8 548 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF354CQ86Y25 554 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 DCLK2Q8N568 766 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TSEN2Q8NCE0 465 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 EXD1Q8NHP7 514 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 DNASE2BQ8WZ79 361 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 FATE1Q969F0 183 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 ARRDC3Q96B67 414 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TSGA13Q96PP4 275 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 GPR174Q9BXC1 333 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CPEB1Q9BZB8 566 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SP110Q9HB58 689 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TMEM74BQ9NUR3 256 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 DTLQ9NZJ0 730 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 IL36AQ9UHA7 158 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 GMEB2Q9UKD1 530 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PILRBQ9UKJ0 227 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CAPN6Q9Y6Q1 641 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 NUMA1Q14980 2115 aa6.27□□□□□ -1.4
CNOT1-204ENST00000563130 FRYLO94915 3013 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 GVINP1Q7Z2Y8 2422 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 TNRC6BQ9UPQ9 1833 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 MACROD2A1Z1Q3 448 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 CCDC66A2RUB6 948 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 MUSKO15146 869 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 PLRG1O43660 514 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 NDUFS2O75306 463 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 PALMO75781 387 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 RNASEH2AO75792 299 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ZRANB2O95218 330 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■□□ 17.1
CNOT1-204ENST00000563130 SEMA4FO95754 770 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 KRT1P04264 644 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 CR2P20023 1033 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ITGB7P26010 798 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 CTNNA2P26232 953 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 GKP32189 559 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 HOXD12P35452 270 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 MPLP40238 635 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 RGRP47804 291 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ADPRHP54922 357 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 TAS2R38P59533 333 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 RHOAP61586 193 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ADCY2Q08462 1091 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 HNRNPDQ14103 355 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 LBRQ14739 615 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ATXN7L2Q5T6C5 722 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-204ENST00000563130 PIP5KL1Q5T9C9 394 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 LYSMD4Q5XG99 296 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 SPOCD1Q6ZMY3 1216 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 FAM124AQ86V42 546 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 RCOR2Q8IZ40 523 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 HDDC3Q8N4P3 179 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ATPAF2Q8N5M1 289 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 TEX26Q8N6G2 289 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 OR6K2Q8NGY2 324 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 C1orf216Q8TAB5 229 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 GRIN3AQ8TCU5 1115 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 MAML1Q92585 1016 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ALG3Q92685 438 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 HDAC11Q96DB2 347 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 ITPKCQ96DU7 683 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 HSPA12BQ96MM6 686 aa6.27□□□□□ -1.41
CNOT1-204ENST00000563130 GDAP1L1Q96MZ0 367 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms