RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 A0A0A0MRY4 1105 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 IQCMA0A1B0GVH7 501 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 TARBP2Q15633 366 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 KYAT3Q6YP21 454 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ULK2Q8IYT8 1036 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SPATA13Q96N96 652 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SLC38A2Q96QD8 506 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SEMA3CQ99985 751 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 PEX11AO75192 247 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 GLUD1P00367 558 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 TPP2P29144 1249 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SRP54P61011 504 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 TMEM119Q4V9L6 283 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 KLHL35Q6PF15 583 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 APTXQ7Z2E3 356 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 KAT5Q92993 513 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 VPS4AQ9UN37 437 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ASF1AQ9Y294 204 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ASTN2O75129 1339 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ATP1A4Q13733 1029 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 CAMK1Q14012 370 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 TMC5Q6UXY8 1006 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 GPR142Q7Z601 462 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 BSNDQ8WZ55 320 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 NELL1Q92832 810 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ZFP14Q9HCL3 533 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 CLIC5Q9NZA1 410 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 EML1O00423 815 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 MAPK10P53779 464 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 CORO7P57737 925 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 GPR135Q8IZ08 494 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 OFCC1Q8IZS5 231 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 PCDH20Q8N6Y1 951 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 RPS6KA6Q9UK32 745 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 H3BNH8 94 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SLC28A1O00337 649 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ULK1O75385 1050 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 MTRF1O75570 445 aaKnown RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-204ENST00000562303 MLYCDO95822 493 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ASGR1P07306 291 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 BMP7P18075 431 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ITPKBP27987 946 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 SLC28A3Q9HAS3 691 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ARMCX1Q9P291 453 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 MYRFQ9Y2G1 1151 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 PCDHA11Q9Y5I1 949 aa11.34□□□□□ -0.59
RPAP1-204ENST00000562303 ASNA1O43681 348 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ELFN1P0C7U0 828 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 KELP23276 732 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 S100GP29377 79 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 IL12RB1P42701 662 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 PKNOX1P55347 436 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CRADDP78560 199 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TAB1Q15750 504 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 DACT2Q5SW24 774 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TTC23Q5W5X9 447 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ZFP1Q6P2D0 407 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 DCLRE1AQ6PJP8 1040 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 MCEMP1Q8IX19 187 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 PIGUQ9H490 435 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CLN6Q9NWW5 311 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ST3GAL5Q9UNP4 418 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CORO2BQ9UQ03 480 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 MRPS33Q9Y291 106 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CDC42BPBQ9Y5S2 1711 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CCNA2P20248 432 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 GABRR2P28476 465 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CLCN5P51795 746 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 PTPRNQ16849 979 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 GET4Q7L5D6 327 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 KATNAL2Q8IYT4 538 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 EXOC2Q96KP1 924 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 NDNQ99608 321 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 DCUN1D5Q9BTE7 237 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TLE6Q9H808 572 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 IMP3Q9NV31 184 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms