RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CSRP3P50461 194 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TKTL1P51854 596 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 NDST2P52849 883 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 RABGGTBP53611 331 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 EN1Q05925 392 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 POTEHQ6S545 545 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 AFAP1L2Q8N4X5 818 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 B3GALNT2Q8NCR0 500 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SPPL2BQ8TCT7 592 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TOP1MTQ969P6 601 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SLCO4A1Q96BD0 722 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HSPBAP1Q96EW2 488 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CELF6Q96J87 481 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 KIFC1Q9BW19 673 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 NXF3Q9H4D5 531 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CHST12Q9NRB3 414 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 OLAHQ9NV23 265 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 GJD2Q9UKL4 321 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 UBQLN1Q9UMX0 589 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SNX10Q9Y5X0 201 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 RAD54BQ9Y620 910 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SQORQ9Y6N5 450 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SCN4AP35499 1836 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MCM3APO60318 1980 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ZNF839A8K0R7 811 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 FBP2O00757 339 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MRASO14807 208 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HTRA2O43464 458 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 NPR3P17342 541 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ALDH3B2P48448 385 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ARHGAP1Q07960 439 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 LRP8Q14114 963 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SQLEQ14534 574 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 PPP1R3AQ16821 1122 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 LINC00523Q86TU6 105 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 PELI3Q8N2H9 469 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 FAM47BQ8NA70 645 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HEXDCQ8WVB3 486 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HDAC11Q96DB2 347 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TEKT5Q96M29 485 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 GPR78Q96P69 363 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CLK4Q9HAZ1 481 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 GOLGA2P5Q9HBQ8 144 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TXNRD2Q9NNW7 524 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 RRN3Q9NYV6 651 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CNOT6Q9ULM6 557 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 AP3B1O00203 1094 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 PLOD2O00469 737 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TRIM24O15164 1050 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CNMDO75829 334 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SRP72O76094 671 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MT-CO1P00395 513 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MAP3K7CLP57077 242 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ESRRGP62508 458 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SULT2A1Q06520 285 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TRAP1Q12931 704 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CSHL1Q14406 222 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 PCID2Q5JVF3 399 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 DLK2Q6UY11 383 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 RPS27LQ71UM5 84 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SPATA22Q8NHS9 363 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 ZNF560Q96MR9 790 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 VAT1Q99536 393 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MRPL57Q9BQC6 102 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 BRD8Q9H0E9 1235 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 FAM49AQ9H0Q0 323 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 DDIT4Q9NX09 232 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 CROTQ9UKG9 612 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 NRP1O14786 923 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 SNRPB2P08579 225 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 NCAM1P13591 858 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 HOXA11P31270 313 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 TAS2R39P59534 338 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 PLOD1Q02809 727 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 ARL13BQ3SXY8 428 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 HMBOX1Q6NT76 420 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 ESRP1Q6NXG1 681 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 PKN3Q6P5Z2 889 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 KLHL35Q6PF15 583 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 TRIM74Q86UV6 250 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 DHFR2Q86XF0 187 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 MFSD6LQ8IWD5 586 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 IPMKQ8NFU5 416 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 RIN3Q8TB24 985 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 OSBPL2Q9H1P3 480 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 CSADQ9Y600 493 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 LRRC37A2A6NM11 1700 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 I6L893 689 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 CD4P01730 458 aa14.1□□□□□ -0.15
VPS9D1-202ENST00000561976 HSPA8P11142 646 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms