RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 UNKQ9C0B0 810 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 INTS13Q9NVM9 706 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 MARCH2Q9P0N8 246 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 IPO11Q9UI26 975 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 ERRFI1Q9UJM3 462 aaPredicted RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 STRIP2Q9ULQ0 834 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CEP83Q9Y592 693 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 ACTL7BQ9Y614 415 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 VWA3AA6NCI4 1184 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 MKRN2OSH3BPM6 223 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 K7EM74 188 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 TPP1O14773 563 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 SLC7A4O43246 635 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 DUX1O43812 170 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 PFKFB2O60825 505 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 MED26O95402 600 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 LDHAP00338 332 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 CSF2P04141 144 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 ASLP04424 464 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 RPLP0P05388 317 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 ANXA6P08133 673 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 FAM163BP0C2L3 166 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 CCDC130P13994 396 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 NME1P15531 152 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 HNRNPA2B1P22626 353 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 CSKP41240 450 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 ASPAP45381 313 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 ZNF131P52739 623 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 METAP1P53582 386 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 COPB1P53618 953 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 GUCY1B3Q02153 619 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 KCNA1Q09470 495 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 CDC20Q12834 499 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 MRPL49Q13405 166 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 MAP7Q14244 749 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 FZD2Q14332 565 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
HERC1-213ENST00000561359 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 TCTN3Q6NUS6 607 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 ESRP1Q6NXG1 681 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 ACOT1Q86TX2 421 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 PARGQ86W56 976 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 DCP2Q8IU60 420 aaKnown RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 FUKQ8N0W3 1084 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 SLC22A18ASQ8N1D0 253 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 C4orf32Q8N8J7 132 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 WFDC5Q8TCV5 224 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 SLC2A14Q8TDB8 520 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 PTPRN2Q92932 1015 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 TTC17Q96AE7 1141 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 TMEM159Q96B96 161 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 TCTN2Q96GX1 697 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 C5orf34Q96MH7 638 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 BOCQ9BWV1 1114 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 PDRG1Q9NUG6 133 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 AKAP7Q9P0M2 348 aaPredicted RBP5.46□□□□□ -1.54
HERC1-213ENST00000561359 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 ERVW-1Q9UQF0 538 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 DAAM1Q9Y4D1 1078 aa5.46□□□□□ -1.54
HERC1-213ENST00000561359 A0A1W2PQM1 296 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 A0A1W2PQU0 124 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 A6NNZ2 444 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 TBL1XO60907 577 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 KIF20AO95235 890 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 F13BP05160 661 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 SLFN14P0C7P3 912 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 FAM200BP0CF97 657 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 PDIA4P13667 645 aaKnown RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 ADORA2BP29275 332 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 SGSHP51688 502 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 ADKP55263 362 aaKnown RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 ZNF445P59923 1031 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 CNTN1Q12860 1018 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 TRPC3Q13507 836 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 C1orf61Q13536 156 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 ELAVL3Q14576 367 aaKnown RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 HYIQ5T013 277 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 ADGRF1Q5T601 910 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 PHF19Q5T6S3 580 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 FAM46CQ5VWP2 391 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 NXPE4Q6UWF7 544 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 GCNT7Q6ZNI0 430 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 TRAPPC11Q7Z392 1133 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 ABI3BPQ7Z7G0 1075 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 SCD5Q86SK9 330 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 MFN1Q8IWA4 741 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 FAM217AQ8IXS0 508 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 CCDC13Q8IYE1 715 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 CACNA2D3Q8IZS8 1091 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 SYCP3Q8IZU3 236 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 Q8N9G6 341 aaPredicted RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 KIAA1143Q96AT1 154 aaPredicted RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 SLC45A3Q96JT2 553 aa5.45□□□□□ -1.54
HERC1-213ENST00000561359 RPL10LQ96L21 214 aaKnown RBP5.45□□□□□ -1.54
HERC1-213ENST00000561359 MRGPRX3Q96LB0 322 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms