RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FEM1CQ96JP0 617 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 ORAI3Q9BRQ5 295 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 FZD3Q9NPG1 666 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 LHX3Q9UBR4 397 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 SH3BP5O60239 455 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 PIGNO95427 931 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 WNT1P04628 370 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CD48P09326 243 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 TNNT1P13805 278 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CD59P13987 128 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 AKT2P31751 481 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CCT8P50990 548 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 RPS21P63220 83 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 IL9RQ01113 521 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 IL10RBQ08334 325 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 SGCGQ13326 291 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF235Q14590 738 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 GRM3Q14832 879 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPA17Q15506 151 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 AFMIDQ63HM1 303 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 SEL1L3Q68CR1 1132 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 TSEN2Q8NCE0 465 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CAMK1GQ96NX5 476 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 GDF3Q9NR23 364 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CA5BQ9Y2D0 317 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 FADS3Q9Y5Q0 445 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 ASCC3Q8N3C0 2202 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 TMEM131Q92545 1883 aa13.14□□□□□ -0.31
CTDSPL2-209ENST00000560620 CACNA1EQ15878 2313 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 H0Y8X5 98 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 TLR4O00206 839 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 INSIG1O15503 277 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 TSPAN6O43657 245 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 DFNA5O60443 496 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 GJB3O75712 270 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 NEBLO76041 1014 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ADRB1P08588 477 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 HNRNPA2B1P22626 353 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAN1A1P33908 653 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ARHGAP25P42331 645 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 CTSKP43235 329 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAGEA1P43355 309 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 SCNN1BP51168 640 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 RENBPP51606 427 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 TAS2R40P59535 323 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 SIM1P81133 766 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 LBRQ14739 615 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 PDK2Q15119 407 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF284Q2VY69 593 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 KIAA1161Q6NSJ0 714 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 KLHDC7BQ96G42 594 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ELF4Q99607 663 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 SLC17A9Q9BYT1 436 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ATP13A3Q9H7F0 1226 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZFR2Q9UPR6 939 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 A0A1W2PR77 199 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 LRRD1A4D1F6 860 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 AP1G1O43747 822 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPOPO43791 374 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF883P0CG24 379 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 SERPINA4P29622 427 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 ABL2P42684 1182 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 CLDN2P57739 230 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 BCL2L1Q07817 233 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 SLC10A7Q0GE19 358 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 FOXC1Q12948 553 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms