RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 AGAP2Q99490 1192 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 CCDC28BQ9BUN5 200 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ACE2Q9BYF1 805 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 C20orf27Q9GZN8 174 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 DRC3Q9H069 523 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ILKAPQ9H0C8 392 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 CDH19Q9H159 772 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SP110Q9HB58 689 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 BATF3Q9NR55 127 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 PIH1D1Q9NWS0 290 aaKnown RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 GMIPQ9P107 970 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SLC17A6Q9P2U8 582 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 PCDHB7Q9Y5E2 793 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 NUMBLQ9Y6R0 609 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 FAM95CA0A1B0GW59 222 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 MTMR11A4FU01 709 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 B2RBV5 119 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 TARM1B6A8C7 271 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ZNF195O14628 629 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ENPP3O14638 875 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 MSI1O43347 362 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 ITM2AO43736 263 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 B4GALT3O60512 393 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 CIB2O75838 187 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 HSPA4LO95757 839 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 AHSGP02765 367 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 FGF1P05230 155 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 TPBGLP0DKB5 382 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 GNAZP19086 355 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 HLA-DPA1P20036 260 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 CES1P23141 567 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 PGM1P36871 562 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 LEPRP48357 1165 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 SLC12A2P55011 1212 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ACVR1Q04771 509 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 GALNT1Q10472 559 aaPredicted RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 ITGA9Q13797 1035 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 RCN2Q14257 317 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 PPM1JQ5JR12 505 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 CFAP157Q5JU67 520 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 TSTD2Q5T7W7 516 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 FAM171A1Q5VUB5 890 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 TLDC1Q6P9B6 456 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 EPGNQ6UW88 154 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ARHGAP36Q6ZRI8 547 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ZCCHC23Q6ZST2 131 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 RAPH1Q70E73 1250 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 PIWIL4Q7Z3Z4 852 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 C14orf80Q86SX3 495 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ALYREFQ86V81 257 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 SPATA22Q8NHS9 363 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 USP33Q8TEY7 942 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 FAR2Q96K12 515 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ZNF778Q96MU6 729 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 CASD1Q96PB1 797 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 NUDCD1Q96RS6 583 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ZIC5Q96T25 663 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 MRPL57Q9BQC6 102 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 MRPL46Q9H2W6 279 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 MFSD1Q9H3U5 465 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 DENND2DQ9H6A0 471 aaPredicted RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 NOL6Q9H6R4 1146 aaKnown RBP9.81□□□□□ -0.84
RTF1-206ENST00000560447 POPDC3Q9HBV1 291 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 GPAMQ9HCL2 828 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 MARCH2Q9P0N8 246 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 ZNF212Q9UDV6 495 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 FBXO5Q9UKT4 447 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 SLC39A10Q9ULF5 831 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 LRFN2Q9ULH4 789 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 BACE2Q9Y5Z0 518 aa9.81□□□□□ -0.84
RTF1-206ENST00000560447 LOC285095A0A1B0GVY8 99 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 CCDC189A1A4V9 331 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 MROH6A6NGR9 719 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 A8MUI8 341 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 HDAC3O15379 428 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 RAMP2O60895 175 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 FKBP6O75344 327 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 LUC7L3O95232 432 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 MOCS2O96007 188 aaPredicted RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 MT-CYBP00156 380 aaPredicted RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 ENO1P06733 434 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 RBP1P09455 135 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 OR4Q2P0C623 313 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 SLC35E2BP0CK96 405 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 CPB1P15086 417 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TPH1P17752 444 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 TUFMP49411 452 aaKnown RBP9.8□□□□□ -0.84
RTF1-206ENST00000560447 IDH3AP50213 366 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 NAA20P61599 178 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 SATB1Q01826 763 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 EFEMP1Q12805 493 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 OLIG2Q13516 323 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 SERINC3Q13530 473 aa9.8□□□□□ -0.84
RTF1-206ENST00000560447 RFTN1Q14699 578 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms