RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 LGMNQ99538 433 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 TM6SF2Q9BZW4 377 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 DUSP15Q9H1R2 295 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 ZDHHC6Q9H6R6 413 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 KCTD5Q9NXV2 234 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 FEZ2Q9UHY8 353 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 DNPEPQ9ULA0 475 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 RPL26L1Q9UNX3 145 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 WASF2Q9Y6W5 498 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 CTAGE9A4FU28 777 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 GOLGA6CA6NDK9 693 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ANTXRLA6NF34 631 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 H7C0C1 242 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 LEFTY1O75610 366 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 RNASEH2AO75792 299 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 GOLGA6DP0CG33 693 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 CR2P20023 1033 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 XPAP23025 273 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ACTN2P35609 894 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ATP5OP48047 213 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 PSMD8P48556 350 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 SCNN1BP51168 640 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 EIF3EP60228 445 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ITKQ08881 620 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ELP6Q0PNE2 266 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 CCNG2Q16589 344 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 HDDC3Q8N4P3 179 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 PAF1Q8N7H5 531 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 OR2T34Q8NGX1 318 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 TPSD1Q9BZJ3 242 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 SUV39H2Q9H5I1 410 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 PREBQ9HCU5 417 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 GOLGA6AQ9NYA3 693 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 WSB2Q9NYS7 404 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 SNX12Q9UMY4 172 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 MUC6Q6W4X9 2439 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
RABGGTA-215ENST00000560207 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 GOLGA6L10A0A0M3HER8 536 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 TSPAN11A1L157 253 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 MID1O15344 667 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 TSPAN6O43657 245 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 CEP104O60308 925 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 OPHN1O60890 802 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 JCHAINP01591 159 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 VAV1P15498 845 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 PECAM1P16284 738 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 CCR5P51681 352 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 WDR45BQ5MNZ6 344 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 DCAF12L1Q5VU92 463 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 LAIR1Q6GTX8 287 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 CCDC70Q6NSX1 233 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ERAP2Q6P179 960 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 NCEH1Q6PIU2 408 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 TP53INP2Q8IXH6 220 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 RAVER1Q8IY67 606 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 RASGEF1CQ8N431 466 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 CHST14Q8NCH0 376 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 SLC35B2Q8TB61 432 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 FAM174AQ8TBP5 190 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ZNF419Q96HQ0 510 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 TEKT5Q96M29 485 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 ADGRE3Q9BY15 652 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 SLC25A51Q9H1U9 297 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 MTG2Q9H4K7 406 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 NT5MQ9NPB1 228 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 SUSD2Q9UGT4 822 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 EVLQ9UI08 416 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 DRG1Q9Y295 367 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-215ENST00000560207 TNRC6BQ9UPQ9 1833 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 C16orf96A6NNT2 1141 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 KCNK1O00180 336 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PGRMC1O00264 195 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 HTRA2O43464 458 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 HRO43593 1189 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PLRG1O43660 514 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 RNGTTO60942 597 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 LRP3O75074 770 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ANXA9O76027 345 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 SEMA4FO95754 770 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms