RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TDRD3Q9H7E2 651 aaKnown RBP13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 PCDH12Q9NPG4 1184 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 NAALADL1Q9UQQ1 740 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 CCNDBP1O95273 360 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 HMGCRP04035 888 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 DCKP27707 260 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 BUD31P41223 144 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLC7A2P52569 658 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 DGLUCYQ7Z3D6 616 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 FBXW8Q8N3Y1 598 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 LPCAT1Q8NF37 534 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 TCP10LQ8TDR4 215 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 CD101Q93033 1021 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 GJB4Q9NTQ9 266 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 TRHDEQ9UKU6 1024 aa13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 SAMHD1Q9Y3Z3 626 aaKnown RBP13.97□□□□□ -0.17
CSPG4P12-202ENST00000559989 SYNMO15061 1565 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 KPNA3O00505 521 aaPredicted RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 KDM4BO94953 1096 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 FSBPO95073 299 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 MSL3P1P0C860 447 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 RPL5P46777 297 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 AADACL4Q5VUY2 407 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 FAM92BQ6ZTR7 304 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZZZ3Q8IYH5 903 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 MAFIPQ8WZ33 124 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 KLK7P49862 253 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 GCNT7Q6ZNI0 430 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 GALNT7Q86SF2 657 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 NEDD1Q8NHV4 660 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SELENOMQ8WWX9 145 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZNF75CPQ92670 426 aaPredicted RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 DHRS1Q96LJ7 313 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SYT15Q9BQS2 421 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 A0A1B0GVC2 190 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLC28A2O43868 658 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 GCATO75600 419 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 GNRH1P01148 92 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ADAM8P78325 824 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SCN1BQ07699 218 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 CXorf57Q6NSI4 855 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SNX20Q7Z614 316 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYB561D2O14569 222 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ORC5O43913 435 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 LSM8O95777 96 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ALADP13716 330 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 EIF3KQ9UBQ5 218 aaKnown RBP13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZSCAN5BA6NJL1 495 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 UGT2B17O75795 530 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 PLEKP08567 350 aaPredicted RBP13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 ANXA5P08758 320 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 FAPQ12884 760 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 MAPKAPK3Q16644 382 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 TTC7BQ86TV6 843 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 SLC34A3Q8N130 599 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 OR4A15Q8NGL6 344 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 C1GALT1C1Q96EU7 318 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 COMMD4Q9H0A8 199 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 URODP06132 367 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 STOMP27105 288 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 CDH5P33151 784 aaPredicted RBP13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 MARSP56192 900 aaKnown RBP13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 MCL1Q07820 350 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 DPYSQ14117 519 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 ANXA8L1Q5VT79 327 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 RTL4Q6ZR62 310 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 FBXO44Q9H4M3 255 aa13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 RBM22Q9NW64 420 aaKnown RBP eCLIP13.96□□□□□ -0.18
CSPG4P12-202ENST00000559989 B8ZZF3 427 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 OR1I1O60431 355 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 IFNA7P01567 189 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 CYP2C9P11712 490 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 HOXB8P17481 243 aaPredicted RBP13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 PKNOX1P55347 436 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 ATP13A4Q4VNC1 1196 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 ATG4AQ8WYN0 398 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 LPAR1Q92633 364 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 KCNF1Q9H3M0 494 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 AP2A2O94973 939 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 MTHFD1P11586 935 aaKnown RBP13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 RGS19P49795 217 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 CRY1Q16526 586 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 MIB1Q86YT6 1006 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 POU5F2Q8N7G0 328 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 HM13Q8TCT9 377 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 CCDC107Q8WV48 283 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZNF180Q9UJW8 692 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 RIPK2O43353 540 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 NOL4O94818 638 aa13.95□□□□□ -0.18
CSPG4P12-202ENST00000559989 CCR1P32246 355 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms