RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IL12RB1P42701 662 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 CCNHP51946 323 aaPredicted RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 AP1S1P61966 158 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 CAV1Q03135 178 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 NSUN2Q08J23 767 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM1-221ENST00000559831 MPP3Q13368 585 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 TPSAB1Q15661 275 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 NCEH1Q6PIU2 408 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 KDELC1Q6UW63 502 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 ZDHHC24Q6UX98 284 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 HOOK3Q86VS8 718 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 CHPFQ8IZ52 775 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 SLC25A41Q8N5S1 370 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 ZNF513Q8N8E2 541 aaPredicted RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 NAT8LQ8N9F0 302 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 FBXO25Q8TCJ0 367 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 FRS2Q8WU20 508 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 EZH1Q92800 747 aaPredicted RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 ISG20Q96AZ6 181 aaKnown RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 IFT43Q96FT9 208 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 PWWP2AQ96N64 755 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 ACOX2Q99424 681 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 TBL1YQ9BQ87 522 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 APOL2Q9BQE5 337 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 FSD1LQ9BXM9 530 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 LRRC40Q9H9A6 602 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 EIF2B3Q9NR50 452 aaKnown RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 ARHGEF3Q9NR81 526 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 HCN2Q9UL51 889 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 SHOC2Q9UQ13 582 aa10.56□□□□□ -0.72
TPM1-221ENST00000559831 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
TPM1-221ENST00000559831 XIRP2A4UGR9 3374 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 EDDM13A0A1B0GTR0 161 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 ERI2A8K979 691 aaKnown RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 WASH3PC4AMC7 463 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 PIGNO95427 931 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 AGTP01019 485 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 EPHX1P07099 455 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 MYBL2P10244 700 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 TNFRSF8P28908 595 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 MAGEA6P43360 314 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 MAPK8P45983 427 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 CSNK1DP48730 415 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 WNT3AP56704 352 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 RAD51Q06609 339 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 MTM1Q13496 603 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 IHHQ14623 411 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 E2F5Q15329 346 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 MYLK3Q32MK0 819 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 RALGPS1Q5JS13 557 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 KCTD11Q693B1 232 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 WDR93Q6P2C0 686 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 CCNI2Q6ZMN8 369 aaPredicted RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 ZNF852Q6ZMS4 543 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 DPY19L3Q6ZPD9 716 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 CCDC25Q86WR0 208 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 GJD3Q8N144 294 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 STK40Q8N2I9 435 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 KDM1BQ8NB78 822 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 GRIN3AQ8TCU5 1115 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 NSMCE3Q96MG7 304 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 PIH1D1Q9NWS0 290 aaKnown RBP10.55□□□□□ -0.72
TPM1-221ENST00000559831 MUTYHQ9UIF7 546 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 STARD13Q9Y3M8 1113 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 RAI2Q9Y5P3 530 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 STON1Q9Y6Q2 735 aa10.55□□□□□ -0.72
TPM1-221ENST00000559831 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SMAPO00193 183 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 TP73O15350 636 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 RNF40O75150 1001 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SIN3BO75182 1162 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 POP4O95707 220 aaKnown RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 HNRNPLP14866 589 aaKnown RBP eCLIP10.54□□□□□ -0.724e-7■■□□□ 13.3
TPM1-221ENST00000559831 CA4P22748 312 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SERPINA4P29622 427 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 ECHS1P30084 290 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 GRIA1P42261 906 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 KIR2DL1P43626 348 aaPredicted RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 ARL4CP56559 192 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SESN2P58004 480 aaPredicted RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 PRKCQQ04759 706 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 BCL2L1Q07817 233 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 TRAF2Q12933 501 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms