RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GRSF1Q12849 480 aaKnown RBP eCLIP16.78■□□□□ 0.28
TPM1-219ENST00000559397 CCINQ13939 588 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 LINGO4Q6UY18 593 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 NUDT18Q6ZVK8 323 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 CAND1Q86VP6 1230 aaKnown RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 ZBED8Q8IZ13 594 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 CYB5D2Q8WUJ1 264 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 MYO19Q96H55 970 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 SEPT10Q9P0V9 454 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 ERVW-1Q9UQF0 538 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 BANF1O75531 89 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 ATP5BP06576 529 aaKnown RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 STK19P49842 368 aaPredicted RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 TIGD7Q6NT04 549 aaPredicted RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 ZNF534Q76KX8 674 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 SIX5Q8N196 739 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 MAML1Q92585 1016 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 PGM2Q96G03 612 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 SHDQ96IW2 340 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 RPL10LQ96L21 214 aaKnown RBP16.78■□□□□ 0.28
TPM1-219ENST00000559397 HS3ST2Q9Y278 367 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 TEX264Q9Y6I9 313 aa16.78■□□□□ 0.28
TPM1-219ENST00000559397 MATN3O15232 486 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 SRPRAP08240 638 aaKnown RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 KIR2DL1P43626 348 aaPredicted RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 IFI35P80217 286 aaPredicted RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 SLC20A2Q08357 652 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 ZBTB17Q13105 803 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 STAT4Q14765 748 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 BBS9Q3SYG4 887 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 EMC10Q5UCC4 262 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 RETSATQ6NUM9 610 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 PID1Q7Z2X4 250 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 SH2D3CQ8N5H7 860 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 EDAQ92838 391 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 ZNF599Q96NL3 588 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 CEP41Q9BYV8 373 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 KLHL8Q9P2G9 620 aaPredicted RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 THAP10Q9P2Z0 257 aaPredicted RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 UBA2Q9UBT2 640 aaPredicted RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
TPM1-219ENST00000559397 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
TPM1-219ENST00000559397 A0A087WUV0 522 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 KANSL1LA0AUZ9 987 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 K7ERQ8 282 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 RASGRF2O14827 1237 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 CHRNB1P11230 501 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 MLNP12872 115 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 SRCP12931 536 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 PSMB4P28070 264 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 CD68P34810 354 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 SERPINH1P50454 418 aaKnown RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 GPX6P59796 221 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 RFTN1Q14699 578 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 CYTH1Q15438 398 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 CCDC38Q502W7 563 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 INO80DQ53TQ3 878 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 HP1BP3Q5SSJ5 553 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 SYCP2LQ5T4T6 812 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 EGFLAMQ63HQ2 1017 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 ANKMY2Q8IV38 441 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 AGGF1Q8N302 714 aaeCLIP16.76■□□□□ 0.27
TPM1-219ENST00000559397 TEX26Q8N6G2 289 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 ATP11CQ8NB49 1132 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 PYROXD1Q8WU10 500 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 UCMAQ8WVF2 138 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 TLCD1Q96CP7 247 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 ZNF419Q96HQ0 510 aaPredicted RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 IL12RB2Q99665 862 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 GORASP1Q9BQQ3 440 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 GBA3Q9H227 469 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 XAB2Q9HCS7 855 aaKnown RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 LTB4R2Q9NPC1 389 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 SLC25A13Q9UJS0 675 aa16.76■□□□□ 0.27
TPM1-219ENST00000559397 NDRG2Q9UN36 371 aaKnown RBP16.76■□□□□ 0.27
TPM1-219ENST00000559397 E7EVH7 732 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 SMAD6O43541 496 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 DCXO43602 365 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 JCHAINP01591 159 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 HNRNPLP14866 589 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■■□□□ 12.2
TPM1-219ENST00000559397 GYS2P54840 703 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 GEMIN4P57678 1058 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 SIGLEC14Q08ET2 396 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 SLC10A7Q0GE19 358 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FZD5Q13467 585 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 HNRNPDQ14103 355 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 TMCO4Q5TGY1 634 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 KCTD16Q68DU8 428 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ITPRIPL1Q6GPH6 555 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 IGDCC3Q8IVU1 814 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms