RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PDE1CQ14123 709 aaPredicted RBP20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 STX1AQ16623 288 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 SOWAHCQ53LP3 525 aaPredicted RBP20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 APTXQ7Z2E3 356 aaKnown RBP20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 AOPEPQ8N6M6 819 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 C3orf20Q8ND61 904 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 ANKRD20A12PQ8NF67 263 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 HMCESQ96FZ2 354 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 BBC3Q96PG8 261 aaPredicted RBP20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 TCEAL2Q9H3H9 227 aaPredicted RBP20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 PCDHB1Q9Y5F3 818 aa20.8■□□□□ 0.92
TSPAN3-206ENST00000559373 LY6G6EA0A0G2JKS1 128 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 TCRBV5S1A1TA0A578 114 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 K7ESM1 405 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 FPGTO14772 594 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 AP1G1O43747 822 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 MMP20O60882 483 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 POP4O95707 220 aaKnown RBP20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 GSRP00390 522 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 MT-CO3P00414 261 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 CDK4P11802 303 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 OGDHQ02218 1023 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 ILKQ13418 452 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 NCAPHQ15003 741 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 TCEA2Q15560 299 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 EFHC2Q5JST6 749 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 KYAT3Q6YP21 454 aaKnown RBP20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 TTC7BQ86TV6 843 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 VPS36Q86VN1 386 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 RTL3Q8N8U3 475 aaKnown RBP20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 NTAN1Q96AB6 310 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 C1QTNF2Q9BXJ5 285 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 SCUBE2Q9NQ36 999 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 FZD10Q9ULW2 581 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 COQ6Q9Y2Z9 468 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 U3KQA8 63 aa20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 ARHGEF17Q96PE2 2063 aaPredicted RBP20.79■□□□□ 0.92
TSPAN3-206ENST00000559373 UNC13CQ8NB66 2214 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 RASA4BC9J798 803 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 TEX33O43247 280 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 ATMINO43313 823 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 RASA4O43374 803 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 BRINP1O60477 761 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 EIF2S3P41091 472 aaKnown RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 GSCP56915 257 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 GEMIN4P57678 1058 aaKnown RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 RHOAP61586 193 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 DEFB133Q30KQ1 61 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 GDPD4Q6W3E5 623 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 RBFAQ8N0V3 343 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 ZNF548Q8NEK5 533 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 ERGIC2Q96RQ1 377 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 WRAP53Q9BUR4 548 aaKnown RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 GPR27Q9NS67 375 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 NLGN3Q9NZ94 848 aa20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 PNMA8BQ9ULN7 279 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-206ENST00000559373 A0A087WV48 116 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 SPTY2D1-AS1A0A0U1RR47 76 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 SCAMP1O15126 338 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 CASC3O15234 703 aaKnown RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 TSPAN6O43657 245 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 PIGNO95427 931 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 CKMT1AP12532 417 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 JUNDP17535 347 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 IGFALSP35858 605 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 RABIFP47224 123 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 ZNF143P52747 638 aaPredicted RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 HNRNPKP61978 463 aaKnown RBP eCLIP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 C1QBPQ07021 282 aaKnown RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 EIF2B5Q13144 721 aaKnown RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 C1orf61Q13536 156 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 CDKN3Q16667 212 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 ACAD10Q6JQN1 1059 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 DCUN1D2Q6PH85 259 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 CRTC1Q6UUV9 634 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 PLPP6Q8IY26 295 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 LMX1AQ8TE12 382 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 CELF6Q96J87 481 aaKnown RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 GDAP1L1Q96MZ0 367 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 GBP4Q96PP9 640 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 TTYH3Q9C0H2 523 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 MBNL1Q9NR56 388 aaKnown RBP20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 RAI2Q9Y5P3 530 aa20.77■□□□□ 0.92
TSPAN3-206ENST00000559373 MGAQ8IWI9 3026 aa20.77■□□□□ 0.91
TSPAN3-206ENST00000559373 CPED1A4D0V7 1026 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 J3KR12 359 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 OPA1O60313 960 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 CSF2P04141 144 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 ALPPL2P10696 532 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 TIMP2P16035 220 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 ABCG1P45844 678 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 E2F1Q01094 437 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 RTP5Q14D33 572 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 CYTH1Q15438 398 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 PPP1R15BQ5SWA1 713 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 NYAP1Q6ZVC0 841 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 PARGQ86W56 976 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 DCP2Q8IU60 420 aaKnown RBP20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 MCOLN2Q8IZK6 566 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 DCBLD1Q8N8Z6 715 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms