RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 DNAJC14Q6Y2X3 702 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 FGD2Q7Z6J4 655 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 APOBEC3FQ8IUX4 373 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 SLC4A11Q8NBS3 891 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 OSCP1Q8WVF1 389 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 HPS1Q92902 700 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 NSMCE2Q96MF7 247 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 LPIN3Q9BQK8 851 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 BDH2Q9BUT1 245 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PIM2Q9P1W9 311 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ANAPC2Q9UJX6 822 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 UBQLN1Q9UMX0 589 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 TEX264Q9Y6I9 313 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 DHRS12A0PJE2 317 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 TRAFD1O14545 582 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 RGL2O15211 777 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 KATNA1O75449 491 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ZNF682O95780 498 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 S100A6P06703 90 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 USP17L7P0C7H9 530 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 INSRRP14616 1297 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.263e-6■■■□□ 16.3
USP3-210ENST00000559192 GMPSP49915 693 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 CRY2Q49AN0 593 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FSTL4Q6MZW2 842 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 SCIMPQ6UWF3 145 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 AMIGO3Q86WK7 504 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 KBTBD2Q8IY47 623 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ZNF276Q8N554 614 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FBXO30Q8TB52 745 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 RBBP8Q99708 897 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CHRAC1Q9NRG0 131 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 RGS18Q9NS28 235 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 SETD4Q9NVD3 440 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 RBM22Q9NW64 420 aaKnown RBP eCLIP7.18□□□□□ -1.266e-10■■■■□ 22.8
USP3-210ENST00000559192 EMC3Q9P0I2 261 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 SPTLC1O15269 473 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CBFA2T3O75081 653 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 CTSHP09668 335 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 LINC00032P0C843 101 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PRDX6P30041 224 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CCR10P46092 362 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 VAC14Q08AM6 782 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 OLIG2Q13516 323 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PAN2Q504Q3 1202 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 FAM98BQ52LJ0 330 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 FBXO47Q5MNV8 452 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 MBLAC2Q68D91 279 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 OR52E8Q6IFG1 317 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 GALNT18Q6P9A2 607 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ABHD15Q6UXT9 468 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 SZRD1Q7Z422 152 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FNDC5Q8NAU1 212 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 COPS5Q92905 334 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 BORCS5Q969J3 196 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 NXNL1Q96CM4 212 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 IL22Q9GZX6 179 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 RIBC2Q9H4K1 309 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FBXO9Q9UK97 447 aaPredicted RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 HES2Q9Y543 173 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PCDHB12Q9Y5F1 795 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PIPSLA2A3N6 862 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ASB14A6NK59 587 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PMM2O15305 246 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FAM20BO75063 409 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CLASP2O75122 1294 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 SOAT2O75908 522 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 AOC1P19801 751 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 GMPRP36959 345 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 GRM3Q14832 879 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 PFKFB4Q16877 469 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CLEC6AQ6EIG7 209 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 FASTKD5Q7L8L6 764 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 TTC30AQ86WT1 665 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 SIAH1Q8IUQ4 282 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CBR4Q8N4T8 237 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 BPIFB6Q8NFQ5 453 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 TRPC4APQ8TEL6 797 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 HASPINQ8TF76 798 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 ITFG2Q969R8 447 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 MOCOSQ96EN8 888 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 MFSD3Q96ES6 412 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 TBCDQ9BTW9 1192 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 COMMD8Q9NX08 183 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CACNA2D2Q9NY47 1150 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 LIMD1Q9UGP4 676 aa7.18□□□□□ -1.26
USP3-210ENST00000559192 CNOT6Q9ULM6 557 aaKnown RBP7.18□□□□□ -1.26
USP3-210ENST00000559192 CLDN5O00501 218 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 BUD23O43709 281 aaKnown RBP7.17□□□□□ -1.26
USP3-210ENST00000559192 DNAJA2O60884 412 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 CILPO75339 1184 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 PGS1Q32NB8 556 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 TFAP2DQ7Z6R9 452 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 NIPA2Q8N8Q9 360 aa7.17□□□□□ -1.26
USP3-210ENST00000559192 ITFG1Q8TB96 612 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms