RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RSPO2Q6UXX9 243 aaPredicted RBP11.4□□□□□ -0.58
CLPX-204ENST00000559152 TTC7BQ86TV6 843 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 STON2Q8WXE9 905 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 TADA1Q96BN2 335 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SCYL1Q96KG9 808 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 C1QTNF1Q9BXJ1 281 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 NACA2Q9H009 215 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ILKAPQ9H0C8 392 aaPredicted RBP11.4□□□□□ -0.58
CLPX-204ENST00000559152 MAGEH1Q9H213 219 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 TAS2R1Q9NYW7 299 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ARMCX1Q9P291 453 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 MTRRQ9UBK8 725 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ZNF212Q9UDV6 495 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 FBXO5Q9UKT4 447 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
CLPX-204ENST00000559152 CCDC78A2IDD5 438 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 B2RBV5 119 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 MAGEC1O60732 1142 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 PRAMEF11O60813 436 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 VNN2O95498 520 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 CXCL10P02778 98 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ENO1P06733 434 aaKnown RBP11.4□□□□□ -0.58
CLPX-204ENST00000559152 HLA-DPA1P20036 260 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SAT1P21673 171 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ARNTP27540 789 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 GABRB3P28472 473 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SLC1A2P43004 574 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 IDH3AP50213 366 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 CLCN5P51795 746 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ZNF235Q14590 738 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 E2F5Q15329 346 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SLC14A2Q15849 920 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 RABGAP1LQ5R372 815 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SLC25A41Q8N5S1 370 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 SHROOM3Q8TF72 1996 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 STYXQ8WUJ0 223 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 MIPEPQ99797 713 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 EBF4Q9BQW3 602 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 DRC3Q9H069 523 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 CDH19Q9H159 772 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 CRISPLD1Q9H336 500 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 RNPEPL1Q9HAU8 725 aa11.4□□□□□ -0.58
CLPX-204ENST00000559152 NUP205Q92621 2012 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 LOC285095A0A1B0GVY8 99 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 ACSL4O60488 711 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 SERPINB5P36952 375 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 ABCG1P45844 678 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 LEPRP48357 1165 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 LRRC8EQ6NSJ5 796 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 RINLQ6ZS11 566 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 KDELC2Q7Z4H8 507 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 SLC41A1Q8IVJ1 513 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 GIPC2Q8TF65 315 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 SCG3Q8WXD2 468 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 CCDC126Q96EE4 140 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PRR11Q96HE9 360 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 ELMO2Q96JJ3 720 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 KLHL5Q96PQ7 755 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MRPL57Q9BQC6 102 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 CCSER2Q9H7U1 834 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 DCLRE1BQ9H816 532 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PNPOQ9NVS9 261 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 VTI1BQ9UEU0 232 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 SLC2A6Q9UGQ3 507 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 RAP2CQ9Y3L5 183 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 E2F8A0AVK6 867 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 NT5C1B-RDH14C9J2C7 533 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PHGDHO43175 533 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 FGF1P05230 155 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MMP2P08253 660 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 HOXB8P17481 243 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 ATF6P18850 670 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PGM1P36871 562 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 CHRNA4P43681 627 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 CDH4P55283 916 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MAXP61244 160 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MPP1Q00013 466 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 DSC2Q02487 901 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PRKAA1Q13131 559 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 TUBB3Q13509 450 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 RCN2Q14257 317 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 FAM83EQ2M2I3 478 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 HECTD3Q5T447 861 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 LGI2Q8N0V4 545 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 FSTL5Q8N475 847 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 ENDOVQ8N8Q3 282 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 ACVR1CQ8NER5 493 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms