RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ACVR2BQ13705 512 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 DPCR1Q3MIW9 517 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 TDRPQ86YL5 185 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 DHX40Q8IX18 779 aaKnown RBP11.61□□□□□ -0.55
CASC4-208ENST00000559151 OR8H2Q8N162 312 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 LRRC57Q8N9N7 239 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 PABPC5Q96DU9 382 aaKnown RBP11.61□□□□□ -0.55
CASC4-208ENST00000559151 SERINC2Q96SA4 455 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 FBRSL1Q9HCM7 1045 aaKnown RBP11.61□□□□□ -0.55
CASC4-208ENST00000559151 TMEM45AQ9NWC5 275 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 KIR2DS5A0A0G2JLQ3 304 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 TTC36A6NLP5 189 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 F8W810 466 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 KIR2DS3K7RE56 304 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 IRF1P10914 325 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 UNGP13051 313 aaPredicted RBP11.6□□□□□ -0.55
CASC4-208ENST00000559151 MPGP29372 298 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 HDAC4P56524 1084 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 SLC10A2Q12908 348 aaPredicted RBP11.6□□□□□ -0.55
CASC4-208ENST00000559151 ALG11Q2TAA5 492 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 GALNT5Q7Z7M9 940 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 LURAP1LQ8IV03 231 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 GALNT16Q8N428 558 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 SLC25A41Q8N5S1 370 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
CASC4-208ENST00000559151 DPF1Q92782 380 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 CHFRQ96EP1 664 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 MAP7D2Q96T17 732 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 RIOX1Q9H6W3 641 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 PCDHGB4Q9UN71 923 aa11.6□□□□□ -0.55
CASC4-208ENST00000559151 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
CASC4-208ENST00000559151 CYR61O00622 381 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 PTPN2P17706 415 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 CTPS1P17812 591 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 GARSP41250 739 aaKnown RBP11.59□□□□□ -0.55
CASC4-208ENST00000559151 GHRHRQ02643 423 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 FOXF2Q12947 444 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 RUNX2Q13950 521 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
CASC4-208ENST00000559151 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 UBE2Q1Q7Z7E8 422 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 TBC1D26Q86UD7 250 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
CASC4-208ENST00000559151 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
CASC4-208ENST00000559151 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 SLC6A13Q9NSD5 602 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 RAP2CQ9Y3L5 183 aa11.59□□□□□ -0.55
CASC4-208ENST00000559151 NPIPB11E5RHQ5 1161 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 EBAG9O00559 213 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 TP73O15350 636 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 BCAT2O15382 392 aaPredicted RBP11.58□□□□□ -0.56
CASC4-208ENST00000559151 TFP02787 698 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 CDH2P19022 906 aaPredicted RBP11.58□□□□□ -0.56
CASC4-208ENST00000559151 CENPAP49450 140 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 RPS13P62277 151 aaKnown RBP11.58□□□□□ -0.56
CASC4-208ENST00000559151 LRRC8EQ6NSJ5 796 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 TSSK4Q6SA08 328 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 SERPINA11Q86U17 422 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 PNRC2Q9NPJ4 139 aaKnown RBP11.58□□□□□ -0.56
CASC4-208ENST00000559151 HAO1Q9UJM8 370 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 AGO2Q9UKV8 859 aaKnown RBP11.58□□□□□ -0.56
CASC4-208ENST00000559151 TTLL3Q9Y4R7 772 aa11.58□□□□□ -0.56
CASC4-208ENST00000559151 TRBV5-3A0A0A0MS03 114 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 MYO1GB0I1T2 1018 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 TAF4O00268 1085 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 KIF1CO43896 1103 aaKnown RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 NUDT3O95989 172 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 RYKP34925 604 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 PTGER1P34995 402 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 CHAF1BQ13112 559 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 HIST2H2ACQ16777 129 aaPredicted RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 CFAP58Q5T655 872 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 KIAA1614Q5VZ46 1190 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 HMBOX1Q6NT76 420 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 FAM83HQ6ZRV2 1179 aaPredicted RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 MMABQ96EY8 250 aaPredicted RBP11.57□□□□□ -0.56
CASC4-208ENST00000559151 CMTM3Q96MX0 182 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 CARD8Q9Y2G2 431 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
CASC4-208ENST00000559151 WIPF3A6NGB9 483 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 B4DLN1 442 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 CSH1P0DML2 217 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 CSH2P0DML3 217 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 CTSAP10619 480 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 AKR1B1P15121 316 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 BMP5P22003 454 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 ARHGAP25P42331 645 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 GABRB2P47870 512 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 SNX16P57768 344 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 CSTF3Q12996 717 aaKnown RBP11.56□□□□□ -0.56
CASC4-208ENST00000559151 FGFBP1Q14512 234 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms