RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ALDH1A2O94788 518 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 MAP3K6O95382 1288 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 PYGMP11217 842 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 PLA2G2AP14555 144 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 P2RY2P41231 377 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 CLCN6P51797 869 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 RPS14P62263 151 aaKnown RBP15.77■□□□□ 0.12
LINC01220-201ENST00000558575 C22orf39Q6P5X5 142 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 NPNTQ6UXI9 565 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 ZNF354CQ86Y25 554 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 SYCE1Q8N0S2 351 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 HDDC3Q8N4P3 179 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 CHST14Q8NCH0 376 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 LRRN4Q8WUT4 740 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 RSPH9Q9H1X1 276 aaPredicted RBP15.77■□□□□ 0.12
LINC01220-201ENST00000558575 DTLQ9NZJ0 730 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 HPCAL4Q9UM19 191 aa15.77■□□□□ 0.12
LINC01220-201ENST00000558575 SPTA1P02549 2419 aa15.77■□□□□ 0.11
LINC01220-201ENST00000558575 hCG_1818297A0A087WSY0 165 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 ZSCAN5CA6NGD5 496 aaPredicted RBP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 MCF2LO15068 1137 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 TMCC1O94876 653 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 CFIP05156 583 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 ITPKAP23677 461 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 IL10RBQ08334 325 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 GALNT2Q10471 571 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 MAP7D1Q3KQU3 841 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 INO80DQ53TQ3 878 aaPredicted RBP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 DCAF12L1Q5VU92 463 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 PEAR1Q5VY43 1037 aaPredicted RBP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 DPY19L3Q6ZPD9 716 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 LPCAT2Q7L5N7 544 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 METTL3Q86U44 580 aaKnown RBP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 RFX6Q8HWS3 928 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 PGBD3Q8N328 593 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 ISG20Q96AZ6 181 aaKnown RBP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 CEP44Q9C0F1 390 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 PRDM16Q9HAZ2 1276 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 ITM2CQ9NQX7 267 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 PILRBQ9UKJ0 227 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 SARDHQ9UL12 918 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC01220-201ENST00000558575 PTPN13Q12923 2485 aa15.76■□□□□ 0.11
LINC01220-201ENST00000558575 USP27XA6NNY8 438 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 CST8O60676 142 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 OPHN1O60890 802 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 CTSLP07711 333 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 SERPINB6P35237 376 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 METAP1P53582 386 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 RWDD2BP57060 319 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 TRIP6Q15654 476 aaKnown RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 PPP2R5EQ16537 467 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 CARD16Q5EG05 197 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 TFDP3Q5H9I0 405 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 KAZNQ674X7 775 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 CACUL1Q86Y37 369 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 MMAAQ8IVH4 418 aaKnown RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 PLPP6Q8IY26 295 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 MINDY1Q8N5J2 469 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 PCDH20Q8N6Y1 951 aaKnown RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 SIPA1Q96FS4 1042 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 ZNF419Q96HQ0 510 aaPredicted RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 NSMCE3Q96MG7 304 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 TSGA13Q96PP4 275 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 HEMGNQ9BXL5 484 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 MAK16Q9BXY0 300 aaKnown RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 SAE1Q9UBE0 346 aaPredicted RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 LHX3Q9UBR4 397 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 UBA2Q9UBT2 640 aaPredicted RBP15.75■□□□□ 0.11
LINC01220-201ENST00000558575 PPM1HQ9ULR3 514 aa15.75■□□□□ 0.11
LINC01220-201ENST00000558575 MIF4GDA9UHW6 222 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 APOL1O14791 398 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 MUSKO15146 869 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 BNIP3LO60238 219 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 SH3BP5O60239 455 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 PECAM1P16284 738 aaPredicted RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 GKP32189 559 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 GARSP41250 739 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 RGRP47804 291 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 DNA2P51530 1060 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 GEMIN4P57678 1058 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 DYNLT1P63172 113 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 SLC10A7Q0GE19 358 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 ZNF211Q13398 564 aaPredicted RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 ELAVL3Q14576 367 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 FAM182AQ5T1J6 154 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 ATXN7L2Q5T6C5 722 aaPredicted RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 LYSMD4Q5XG99 296 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 KIAA1324Q6UXG2 1013 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 CASKIN2Q8WXE0 1202 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 RBM41Q96IZ5 413 aaKnown RBP15.74■□□□□ 0.11
LINC01220-201ENST00000558575 OLFM3Q96PB7 478 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 TM6SF2Q9BZW4 377 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 FBRSQ9HAH7 460 aa15.74■□□□□ 0.11
LINC01220-201ENST00000558575 CAPN10Q9HC96 672 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms