RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 IL1BP01584 269 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 NR4A1P22736 598 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 RPL14P50914 215 aaKnown RBP14.08□□□□□ -0.15
SPG11-210ENST00000558319 ITIH5Q86UX2 942 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 GANQ9H2C0 597 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 CHST7Q9NS84 486 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.15
SPG11-210ENST00000558319 ZNF879B4DU55 563 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ACSL4O60488 711 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 TBL1XO60907 577 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 PEX11AO75192 247 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 AMHP03971 560 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 NPR3P17342 541 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 CTNNB1P35222 781 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 GPR1P46091 355 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 CDC42P60953 191 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 PTPAQ15257 358 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 PAGE2BQ5JRK9 111 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 DLG3Q92796 817 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 COX4I2Q96KJ9 171 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ACAT2Q9BWD1 397 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 TRPV5Q9NQA5 729 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 DMTF1Q9Y222 760 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 TOB1P50616 345 aaPredicted RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 FSTL1Q12841 308 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 EARS2Q5JPH6 523 aaKnown RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 HELQQ8TDG4 1101 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 B3GALT6Q96L58 329 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ALG9Q9H6U8 611 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 OSER1Q9NX31 292 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 STOML2Q9UJZ1 356 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ZNF221Q9UK13 617 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 A0A0B4J269 797 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 NRP2O60462 931 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 CRABP2P29373 138 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 CXCL9Q07325 125 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 TNK2Q07912 1038 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 PCSK9Q8NBP7 692 aaKnown RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 KLQ9UEF7 1012 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 PFDN2Q9UHV9 154 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ANKRD63C9JTQ0 380 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 H7C0S8 307 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 RGS14O43566 566 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ECDO95905 644 aaPredicted RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 C9P02748 559 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 SEC13P55735 322 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 SNRPFP62306 86 aaKnown RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 FSCN1Q16658 493 aaKnown RBP14.08□□□□□ -0.16
SPG11-210ENST00000558319 PFKFB4Q16877 469 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 UBE2J2Q8N2K1 259 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 C12orf4Q9NQ89 552 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 ARL15Q9NXU5 204 aa14.08□□□□□ -0.16
SPG11-210ENST00000558319 KCNA10Q16322 511 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 RASAL3Q86YV0 1011 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 TBC1D24Q9ULP9 559 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 E5RJQ4 531 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 SIN3BO75182 1162 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 OMPP47874 163 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 RPS6KA3P51812 740 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 FAAH2Q6GMR7 532 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 CFAP52Q8N1V2 620 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 PLPP4Q5VZY2 271 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 WSCD1Q658N2 575 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 RNF43Q68DV7 783 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 MYDGFQ969H8 173 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 FERD3LQ96RJ6 166 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 CLK4Q9HAZ1 481 aaKnown RBP14.07□□□□□ -0.16
SPG11-210ENST00000558319 PLK2Q9NYY3 685 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 THOP1P52888 689 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 RABGGTBP53611 331 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 CBFBQ13951 182 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 QPCTQ16769 361 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 DMRTB1Q96MA1 342 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 ENOPH1Q9UHY7 261 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 ANKRD6Q9Y2G4 727 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 PEX10O60683 326 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 IFNGR2P38484 337 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 BIKQ13323 160 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 THOC7Q6I9Y2 204 aaKnown RBP14.07□□□□□ -0.16
SPG11-210ENST00000558319 SV2AQ7L0J3 742 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
SPG11-210ENST00000558319 ZC3H12AQ5D1E8 599 aaKnown RBP14.06□□□□□ -0.16
SPG11-210ENST00000558319 CWF19L1Q69YN2 538 aaKnown RBP14.06□□□□□ -0.16
SPG11-210ENST00000558319 MCOLN2Q8IZK6 566 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 PJA1Q8NG27 643 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 CXorf40AQ8TE69 158 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 HPCAL1P37235 193 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 HNMTP50135 292 aa14.06□□□□□ -0.16
SPG11-210ENST00000558319 ARF3P61204 181 aaPredicted RBP14.06□□□□□ -0.16
SPG11-210ENST00000558319 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms