RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 DONSONQ9NYP3 566 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 HDAC6Q9UBN7 1215 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 MALT1Q9UDY8 824 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 BMPR1BO00238 502 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 SOCS5O75159 536 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
VRK1-207ENST00000557352 RPL3P39023 403 aaKnown RBP4.36□□□□□ -1.71
VRK1-207ENST00000557352 ST3GAL1Q11201 340 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 DLG1Q12959 904 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 LPIN1Q14693 890 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 ME3Q16798 604 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 ZNF484Q5JVG2 852 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 RHBDF2Q6PJF5 856 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 MEX3BQ6ZN04 569 aaKnown RBP4.36□□□□□ -1.71
VRK1-207ENST00000557352 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
VRK1-207ENST00000557352 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 HES6Q96HZ4 224 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 IL17FQ96PD4 163 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 ZNF700Q9H0M5 742 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 SRP68Q9UHB9 627 aaKnown RBP4.36□□□□□ -1.71
VRK1-207ENST00000557352 CLDN16Q9Y5I7 305 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 NFS1Q9Y697 457 aa4.36□□□□□ -1.71
VRK1-207ENST00000557352 TOP2BQ02880 1626 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SAA2-SAA4A0A096LPE2 208 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 MAGEA13PA6NCF6 341 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 NPIPB11E5RHQ5 1161 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 PLIN1O60240 522 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 CH25HO95992 272 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 AFPP02771 609 aaKnown RBP4.35□□□□□ -1.71
VRK1-207ENST00000557352 CTPS1P17812 591 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 FMO4P31512 558 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 MCM2P49736 904 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 PEX5P50542 639 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SLC18A2Q05940 514 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 DDR1Q08345 913 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 BLMHQ13867 455 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 CAPSQ13938 189 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SYCP2LQ5T4T6 812 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 DSTYKQ6XUX3 929 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 LINS1Q8NG48 757 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 RFWD2Q8NHY2 731 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SPATA20Q8TB22 786 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 BICD1Q96G01 975 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SCMH1Q96GD3 660 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SPRY4Q9C004 299 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 SDF2L1Q9HCN8 221 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 GRHPRQ9UBQ7 328 aa4.35□□□□□ -1.71
VRK1-207ENST00000557352 WDR81Q562E7 1941 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 J3KR12 359 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 TULP2O00295 520 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 IPO5O00410 1097 aaKnown RBP4.34□□□□□ -1.71
VRK1-207ENST00000557352 HBP1O60381 514 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 VNN2O95498 520 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 SERPINC1P01008 464 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 KRT10P13645 584 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 MYF6P23409 242 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 DHX34Q14147 1143 aaKnown RBP4.34□□□□□ -1.71
VRK1-207ENST00000557352 TIGD6Q17RP2 521 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 FBXO43Q4G163 708 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 CCDC38Q502W7 563 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 SETMARQ53H47 684 aaPredicted RBP4.34□□□□□ -1.71
VRK1-207ENST00000557352 DCAF6Q58WW2 860 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 GJB7Q6PEY0 223 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 AADATQ8N5Z0 425 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 POC1AQ8NBT0 407 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 TRIB2Q92519 343 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 MASTLQ96GX5 879 aa4.34□□□□□ -1.71
VRK1-207ENST00000557352 PRAC2D3DTV9 90 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 NTN3O00634 580 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 SLC25A17O43808 307 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 SP1P08047 785 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 CD72P21854 359 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 CENPAP49450 140 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 ACSM2AQ08AH3 577 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 CUL4BQ13620 913 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 PLEKHO1Q53GL0 409 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 FAM69BQ5VUD6 431 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 C1orf228Q6PIY5 440 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 EXOC3L1Q86VI1 746 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 MON1AQ86VX9 555 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 MYLK4Q86YV6 388 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 DENND6AQ8IWF6 608 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 MB21D2Q8IYB1 491 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 NAGSQ8N159 534 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 ANKRD44Q8N8A2 993 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 ZMIZ2Q8NF64 920 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 RNF183Q96D59 192 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 NPLQ9BXD5 320 aaPredicted RBP4.33□□□□□ -1.72
VRK1-207ENST00000557352 TWSG1Q9GZX9 223 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 CHODLQ9H9P2 273 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 PLCB1Q9NQ66 1216 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 OR6C3Q9NZP0 311 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 CD207Q9UJ71 328 aa4.33□□□□□ -1.72
VRK1-207ENST00000557352 SYNJ1O43426 1573 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 F5H423 210 aaPredicted RBP4.32□□□□□ -1.72
VRK1-207ENST00000557352 CLGNO14967 610 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms