RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TTC3P53804 2025 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CYP3A7-CYP3A51PA0A087WV96 503 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 DNTTP04053 509 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SPARCP09486 303 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 GIMD1P0DJR0 217 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CYP3A7P24462 503 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 NOS2P35228 1153 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PGDP52209 483 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PDK3Q15120 406 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 HSD17B12Q53GQ0 312 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.91□□□□□ -0.983e-9■■■■■ 44.4
SYNE3-205ENST00000557275 FIP1L1Q6UN15 594 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PIWIL2Q8TC59 973 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 NELFAQ9H3P2 528 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SPATA7Q9P0W8 599 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 RGS17Q9UGC6 210 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CFL2Q9Y281 166 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ADAMDEC1O15204 470 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF613Q6PF04 617 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 KLF6Q99612 283 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TXN2Q99757 166 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 C7orf50Q9BRJ6 194 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 FAM126AQ9BYI3 521 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHB7Q9Y5E2 793 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHGB6Q9Y5F9 930 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 EPCAMP16422 314 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 RPL14P50914 215 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 AFF1P51825 1210 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SEC24CP53992 1094 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SGCGQ13326 291 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 AFTPHQ6ULP2 937 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PNLDC1Q8NA58 520 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TRMOQ9BU70 441 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 MAPKAPK3Q16644 382 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 G2E3Q7L622 706 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ADGRG6Q86SQ4 1221 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GRK5P34947 590 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SOX11P35716 441 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 KLHL35Q6PF15 583 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 RNF44Q7L0R7 432 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 PIWIL4Q7Z3Z4 852 aaKnown RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 NKAPQ8N5F7 415 aaKnown RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 NXNL1Q96CM4 212 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 C3orf14Q9HBI5 128 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SEMA3GQ9NS98 782 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GULP1Q9UBP9 304 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 RIIAD1A6NNX1 92 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 NAGLUP54802 743 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 PTENP60484 403 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 FIGNQ5HY92 759 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 KCNMB4Q86W47 210 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 STAG3L4Q8TBR4 150 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 MRPS31Q92665 395 aaKnown RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TIPRLO75663 272 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 CCNYL3P0C7X3 344 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF697Q5TEC3 545 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GTF2IRD2BQ6EKJ0 949 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 CRTC3Q6UUV7 619 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GTF2IRD2Q86UP8 949 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 EXD2Q9NVH0 621 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 PACSIN3Q9UKS6 424 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 WDR62O43379 1518 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 CCNDBP1O95273 360 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 USP17L8P0C7I0 530 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SLC16A2P36021 539 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 NECTIN1Q15223 517 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 UBE2SQ16763 222 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 PLEKHN1Q494U1 663 aaPredicted RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 GPSM1Q86YR5 675 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TRAF6Q9Y4K3 522 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 NPHP3-ACAD11A0A0J9YXS1 232 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 RBAK-RBAKDNI3L0D1 243 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 CAMTA2O94983 1202 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TGDSO95455 350 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SERPINA4P29622 427 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ADNP2Q6IQ32 1131 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ACAD10Q6JQN1 1059 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 HEXDCQ8WVB3 486 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 AP4E1Q9UPM8 1137 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ANKDD1BA6NHY2 528 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TOP3BO95985 862 aaKnown RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 POMCP01189 267 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 MAGEA6P43360 314 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SLCO6A1Q86UG4 719 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 SLC44A3Q8N4M1 653 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 DNAJB3Q8WWF6 145 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 EZH1Q92800 747 aaPredicted RBP8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ACOX2Q99424 681 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 MID1IP1Q9NPA3 183 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 CCDC167Q9P0B6 97 aa8.9□□□□□ -0.98
SYNE3-205ENST00000557275 TFECO14948 347 aaPredicted RBP8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SUV39H1O43463 412 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 PAX7P23759 505 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 PTDSS1P48651 473 aaKnown RBP8.9□□□□□ -0.99
SYNE3-205ENST00000557275 ST3GAL1Q11201 340 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms