RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 BMPR2Q13873 1038 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 RRP1BQ14684 758 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 PTPRRQ15256 657 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CAMK4Q16566 473 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 DDR2Q16832 855 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 EDRF1Q3B7T1 1238 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LBHQ53QV2 105 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 PRR16Q569H4 304 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 RUNDC3AQ59EK9 446 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 RARS2Q5T160 578 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 FAM171A1Q5VUB5 890 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ELP2Q6IA86 826 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ARMC6Q6NXE6 501 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 FUT10Q6P4F1 479 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 DEGS2Q6QHC5 323 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LAYNQ6UX15 382 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 FAM214BQ7L5A3 538 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 TAC4Q86UU9 113 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ZBTB46Q86UZ6 589 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ANKLE2Q86XL3 938 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 NUDCD3Q8IVD9 361 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PHC2Q8IXK0 858 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 KIAA2013Q8IYS2 634 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ADSSL1Q8N142 457 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 RIBC1Q8N443 379 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 CNTD1Q8N815 330 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 OR5T1Q8NG75 326 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LRRC8CQ8TDW0 803 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PIGOQ8TEQ8 1089 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CAPSLQ8WWF8 208 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SEC14L1Q92503 715 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SMG7Q92540 1137 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 AKAP1Q92667 903 aaKnown RBP eCLIP6.27□□□□□ -1.41
TDP1-215ENST00000556498 VWCEQ96DN2 955 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 MTBPQ96DY7 904 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 HSPBAP1Q96EW2 488 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ZNF486Q96H40 463 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 SNX18Q96RF0 628 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 KCNJ15Q99712 375 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 BDH2Q9BUT1 245 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ANKRD2Q9GZV1 360 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 HOXD1Q9GZZ0 328 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 WNT8AQ9H1J5 351 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LRMDAQ9H2I8 198 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 HIPK3Q9H422 1215 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 OSGEPL1Q9H4B0 414 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SLA2Q9H6Q3 261 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 SPON1Q9HCB6 807 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CMTM6Q9NX76 183 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 NDE1Q9NXR1 346 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 KLHL9Q9P2J3 617 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 RSL24D1Q9UHA3 163 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 LIMA1Q9UHB6 759 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 AFF4Q9UHB7 1163 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 CNOT7Q9UIV1 285 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 SMG5Q9UPR3 1016 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 GPR52Q9Y2T5 361 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LEMD3Q9Y2U8 911 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ARL2BPQ9Y2Y0 163 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ZDHHC9Q9Y397 364 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PCDHGA9Q9Y5G4 932 aaKnown RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 PCDHGA8Q9Y5G5 932 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CNTNAP4Q9C0A0 1308 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SPATA31E1Q6ZUB1 1445 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RIMS2Q9UQ26 1411 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 CHD1O14646 1710 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RAB19A4D1S5 217 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 LCHNA4D1U4 455 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RRN3P2A6NIE6 340 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 B4E171 279 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 AGPSO00116 658 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 MSTNO14793 375 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SLC22A2O15244 555 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 GMDSO60547 372 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PFKFB2O60825 505 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 CLEC3AO75596 197 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TRMUO75648 421 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 OR7A10O76100 309 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 DDNO94850 711 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 PGM3O95394 542 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RAB3DO95716 219 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 STARD3NLO95772 234 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 FTCDO95954 541 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 OTCP00480 354 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SNRNP70P08621 437 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 SERPINF2P08697 491 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TPBGLP0DKB5 382 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SRCP12931 536 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ENO3P13929 434 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 IL1R1P14778 569 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TCP1P17987 556 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 NCF2P19878 526 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 RAB3AP20336 220 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 STX2P32856 288 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ACAA2P42765 397 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms