RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PPM1HQ9ULR3 514 aa14.22□□□□□ -0.13
VIPAS39-208ENST00000556412 ATP8A1Q9Y2Q0 1164 aa14.22□□□□□ -0.13
VIPAS39-208ENST00000556412 DOCK4Q8N1I0 1966 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 MIA3Q5JRA6 1907 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 K7ESF4 209 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 MID1O15344 667 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 ZNF189O75820 626 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 ACTN2P35609 894 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 COILP38432 576 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 CD86P42081 329 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 MAPK8P45983 427 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 BCL2L1Q07817 233 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 NIPAL4Q0D2K0 466 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 FAM46CQ5VWP2 391 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 ITPRIPL1Q6GPH6 555 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 DRICH1Q6PGQ1 229 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 GDPD4Q6W3E5 623 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 CAMK1DQ8IU85 385 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 SPATA13Q96N96 652 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 DYRK4Q9NR20 520 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 PRMT8Q9NR22 394 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 UBP1Q9NZI7 540 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 PCDHGC4Q9Y5F7 938 aa14.21□□□□□ -0.13
VIPAS39-208ENST00000556412 MUC22E2RYF6 1773 aaPredicted RBP14.21□□□□□ -0.14
VIPAS39-208ENST00000556412 PLK4O00444 970 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ZNF500O60304 480 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 RNASEH2AO75792 299 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ADH1BP00325 375 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ETS1P14921 441 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CR2P20023 1033 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 SERPINA4P29622 427 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CD68P34810 354 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CSNK1DP48730 415 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 DMWDQ09019 674 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 TRIP13Q15645 432 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 PCSK7Q16549 785 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 NCEH1Q6PIU2 408 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 MAMSTRQ6ZN01 415 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 FAM124AQ86V42 546 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 C12orf50Q8NA57 414 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 TMIEQ8NEW7 156 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 SPATA22Q8NHS9 363 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ARRDC2Q8TBH0 407 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 PPP1R16AQ96I34 528 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 KLHL32Q96NJ5 620 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 OMDQ99983 421 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 LRFN3Q9BTN0 628 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 DRG1Q9Y295 367 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 A0A1W2PP55 124 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 C5orf60A6NFR6 353 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 OPHN1O60890 802 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 SERPINF2P08697 491 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ZSCAN5DPP0CG00 497 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CYP1B1Q16678 543 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 FAXCQ5TGI0 409 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 KDELC2Q7Z4H8 507 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 HDDC3Q8N4P3 179 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 ATL2Q8NHH9 583 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 LRIG1Q96JA1 1093 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 NSMCE3Q96MG7 304 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 TUBGCP5Q96RT8 1024 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 OSBPL1AQ9BXW6 950 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 SLC25A51Q9H1U9 297 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 GBA3Q9H227 469 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 CD93Q9NPY3 652 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 INVSQ9Y283 1065 aa14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 NYNRINQ9P2P1 1898 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-208ENST00000556412 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 AXIN1O15169 862 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 PMPCBO75439 489 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 PAPSS2O95340 614 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 MT-CYBP00156 380 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 C5AR1P21730 350 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 CES1P23141 567 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 PSMB4P28070 264 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 FNTAP49354 379 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 FNTBP49356 437 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 VPS41P49754 854 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 LMNB2Q03252 620 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 PRPSAP1Q14558 356 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 GRM3Q14832 879 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 ANGPT1Q15389 498 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 WHAMMP3Q1A5X7 153 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 RASSF3Q86WH2 238 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 MAML2Q8IZL2 1156 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 AADATQ8N5Z0 425 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 GLIS1Q8NBF1 620 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 SPATA4Q8NEY3 305 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 RLN3Q8WXF3 142 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 ARRDC3Q96B67 414 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 IMP4Q96G21 291 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 CPEB1Q9BZB8 566 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 PABPC3Q9H361 631 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 SUV39H2Q9H5I1 410 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms