RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SERPINB3P29508 390 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 RPS6KA3P51812 740 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 NUDT6P53370 316 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 SEC61A1P61619 476 aaKnown RBP5.38□□□□□ -1.55
PRPF39-209ENST00000556353 PLCB4Q15147 1175 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 ZNF284Q2VY69 593 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 SULT6B1Q6IMI4 303 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 LIN54Q6MZP7 749 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 AADACL2Q6P093 401 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 PRSS57Q6UWY2 283 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 CREB3L2Q70SY1 520 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 RRAGAQ7L523 313 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 SERPINA11Q86U17 422 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 WDR5BQ86VZ2 330 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 CLIP4Q8N3C7 705 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 TMEM163Q8TC26 289 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 TRAPPC9Q96Q05 1148 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 ACAD9Q9H845 621 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 KCND3Q9UK17 655 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 NOS1P29475 1434 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 SCN5AQ14524 2016 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 MMP3P08254 477 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 HSPA1LP34931 641 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 RFC1P35251 1148 aaPredicted RBP5.37□□□□□ -1.55
PRPF39-209ENST00000556353 THPOP40225 353 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 AMTP48728 403 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 COMPP49747 757 aaPredicted RBP5.37□□□□□ -1.55
PRPF39-209ENST00000556353 PDLIM4P50479 330 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 HLFQ16534 295 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 FJX1Q86VR8 437 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 FSIP1Q8NA03 581 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 FAM216AQ8WUB2 273 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 TEFMQ96QE5 360 aaKnown RBP5.37□□□□□ -1.55
PRPF39-209ENST00000556353 CRB3Q9BUF7 120 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 ZNF700Q9H0M5 742 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 PLSCR4Q9NRQ2 329 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 UPB1Q9UBR1 384 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 ZFYVE9O95405 1425 aa5.37□□□□□ -1.55
PRPF39-209ENST00000556353 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 ABHD14A-ACY1A0A1B0GW23 586 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 EYA2O00167 538 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 KIF1CO43896 1103 aaKnown RBP5.36□□□□□ -1.55
PRPF39-209ENST00000556353 NAGAP17050 411 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 SKIV2L2P42285 1042 aaKnown RBP5.36□□□□□ -1.55
PRPF39-209ENST00000556353 PDCLQ13371 301 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 LRRC24Q50LG9 513 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 C9orf50Q5SZB4 431 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 BRSK2Q8IWQ3 736 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 MIGA1Q8NAN2 632 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 RTP4Q96DX8 246 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 TMEM2Q9UHN6 1383 aa5.36□□□□□ -1.55
PRPF39-209ENST00000556353 XRN1Q8IZH2 1706 aaKnown RBP5.36□□□□□ -1.55
PRPF39-209ENST00000556353 PHLPP1O60346 1717 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 COL16A1Q07092 1604 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 DENND3A2RUS2 1198 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 DDTLA6NHG4 134 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 FAM90A20PA6NIJ5 464 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 STRNO43815 780 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 SOX30O94993 753 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 CLDN7O95471 211 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 ZBTB11O95625 1053 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 PPP1R3DO95685 299 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 HMGB1P09429 215 aaKnown RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 TSPY4P0CV99 314 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 TSPY10P0CW01 314 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 AVPR2P30518 371 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 HTR3AP46098 478 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 CLCN5P51795 746 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 RUNDC3AQ59EK9 446 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 ZNF628Q5EBL2 1059 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 C9orf57Q5W0N0 161 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 MON1BQ7L1V2 547 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 C16orf82Q7Z2V1 217 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 CUZD1Q86UP6 607 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 STT3BQ8TCJ2 826 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 OTUD7AQ8TE49 926 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 DNASE2BQ8WZ79 361 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 DDX23Q9BUQ8 820 aaKnown RBP5.35□□□□□ -1.55
PRPF39-209ENST00000556353 RRP7BPQ9NSQ0 103 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 THAP1Q9NVV9 213 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 ICAM5Q9UMF0 924 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 DHDHQ9UQ10 334 aa5.35□□□□□ -1.55
PRPF39-209ENST00000556353 NALCNQ8IZF0 1738 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 CLTCL1P53675 1640 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 NKTRP30414 1462 aaKnown RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 RPRD2Q5VT52 1461 aaKnown RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ANKRD50Q9ULJ7 1429 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 HMX3A6NHT5 357 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 H0Y3Z8 333 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 SEPT4O43236 478 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ITM2AO43736 263 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 KCNJ13O60928 360 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TFRCP02786 760 aaKnown RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ACP5P13686 325 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 DPP6P42658 865 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms